Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_E12
(899 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNR9 Cluster: CG14450-PA; n=2; Sophophora|Rep: CG1445... 60 1e-07
UniRef50_Q5TN70 Cluster: ENSANGP00000025505; n=2; Culicidae|Rep:... 55 2e-06
UniRef50_A3IF87 Cluster: Competence protein comEA; n=1; Bacillus... 39 0.20
UniRef50_Q9CER3 Cluster: Competence protein ComEA; n=3; Lactococ... 37 0.61
UniRef50_UPI0000F2C452 Cluster: PREDICTED: hypothetical protein;... 37 0.81
UniRef50_Q2SJI1 Cluster: DNA uptake protein and related DNA-bind... 35 2.5
UniRef50_Q22SQ2 Cluster: TPR Domain containing protein; n=2; Alv... 35 2.5
UniRef50_Q4WG54 Cluster: DNA repair protein Rad7, protein; n=8; ... 35 3.3
UniRef50_A3I6Z7 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_Q22CS6 Cluster: Uncharacterized ACR, COG2106 family pro... 34 4.3
UniRef50_Q9Y719 Cluster: Cell wall alpha-1,3-glucan synthase mok... 34 4.3
UniRef50_UPI0000E25EAC Cluster: PREDICTED: glypican 4; n=1; Pan ... 34 5.7
UniRef50_Q8DV80 Cluster: Putative competence protein; n=1; Strep... 34 5.7
UniRef50_Q88VD0 Cluster: ComE operon protein 1; n=2; Lactobacill... 34 5.7
UniRef50_A2GK26 Cluster: Putative uncharacterized protein; n=35;... 34 5.7
UniRef50_O75487 Cluster: Glypican-4 precursor; n=56; Euteleostom... 34 5.7
UniRef50_Q5XJP8 Cluster: TLC domain containing 1; n=3; Clupeocep... 33 7.5
UniRef50_Q478W5 Cluster: Competence protein ComEA helix-hairpin-... 33 7.5
UniRef50_A2DFF8 Cluster: Putative uncharacterized protein; n=2; ... 33 7.5
UniRef50_Q6D8B8 Cluster: Putative phage-related reverse transcri... 33 9.9
UniRef50_A1IEZ2 Cluster: Putative uncharacterized protein precur... 33 9.9
UniRef50_Q381L4 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
UniRef50_A7SAG0 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.9
UniRef50_Q8TII6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
>UniRef50_Q9VNR9 Cluster: CG14450-PA; n=2; Sophophora|Rep:
CG14450-PA - Drosophila melanogaster (Fruit fly)
Length = 372
Score = 59.7 bits (138), Expect = 1e-07
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +2
Query: 320 SGSRCCYQ--NLESKYSESQKVKILNVINDDSQT-LSRFDIAKSRLKKFKQWKTSNGQVK 490
SG C Q L YS++ ++KIL IN+ S ++ +DI K+R K + WK +G ++
Sbjct: 25 SGQPECDQAIGLLPAYSDADRLKILKTINESSMNQIANYDITKARATKLQNWKNRHGPLQ 84
Query: 491 TLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQI 592
LSD+ +EGF K K S+L P+ Q+
Sbjct: 85 ELSDILYVEGFGLKVTTKFFKSLLAPPSSGSAQV 118
>UniRef50_Q5TN70 Cluster: ENSANGP00000025505; n=2; Culicidae|Rep:
ENSANGP00000025505 - Anopheles gambiae str. PEST
Length = 340
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 359 YSESQKVKILNVIND-DSQTLSRFDIAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTDKT 535
Y++ + KILN +N+ D + L +++I+K RLKK + W+ G +L + ++GF
Sbjct: 38 YTDEETRKILNTLNEQDVEELYKYNISKYRLKKIEGWRKKFGTFLSLEQVLELDGFGVTV 97
Query: 536 AKKLCDSILNGPTEEVEQISNKIK 607
+K DSI++GP E+ IK
Sbjct: 98 LRKFYDSIVHGPKEDAVVAPKAIK 121
>UniRef50_A3IF87 Cluster: Competence protein comEA; n=1; Bacillus
sp. B14905|Rep: Competence protein comEA - Bacillus sp.
B14905
Length = 211
Score = 38.7 bits (86), Expect = 0.20
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 362 SESQKVKILNVINDDSQTLSRFD-IAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTDKTA 538
SE++ KI N+ D++TL+ I S+ + ++ NG+ +T+ DL + G +KT
Sbjct: 143 SENKDQKI-NINIADTETLATLPGIGPSKAQSILSYREENGRFQTIDDLRNVSGIGEKTF 201
Query: 539 KKLCDSI 559
+KL DSI
Sbjct: 202 EKLKDSI 208
>UniRef50_Q9CER3 Cluster: Competence protein ComEA; n=3; Lactococcus
lactis|Rep: Competence protein ComEA - Lactococcus
lactis subsp. lactis (Streptococcus lactis)
Length = 215
Score = 37.1 bits (82), Expect = 0.61
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 386 LNVINDDSQTLSRFD-IAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTDKTAKKLCDSI 559
+N+ D L + + + + + ++T NG K+L DL + GF DKT +KL D +
Sbjct: 154 ININQADLTELQKLTGVGQKKAQDIIDFRTKNGDFKSLEDLGKVSGFGDKTLEKLKDEL 212
>UniRef50_UPI0000F2C452 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 492
Score = 36.7 bits (81), Expect = 0.81
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 341 QNLESKYSESQKVKILNVINDDS-QTLSRFDIAKSRLK-KFKQWKTSNGQVKTLSDLPLI 514
+ LE YS +K IL V+N S L F + R + + +G + L L +
Sbjct: 190 KRLEDLYSSEEKSAILQVLNTASVNELGAFTFLRGRKSINIVKHREKHGPFQDLESLMEV 249
Query: 515 EGFTDKTAKKLCDSILNGPTEE 580
F K+ K+CDSIL+ ++E
Sbjct: 250 PLFQYKSTVKVCDSILHPESKE 271
>UniRef50_Q2SJI1 Cluster: DNA uptake protein and related DNA-binding
protein; n=1; Hahella chejuensis KCTC 2396|Rep: DNA
uptake protein and related DNA-binding protein - Hahella
chejuensis (strain KCTC 2396)
Length = 101
Score = 35.1 bits (77), Expect = 2.5
Identities = 15/65 (23%), Positives = 37/65 (56%)
Frame = +2
Query: 350 ESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTD 529
+++ +E Q V +N + ++ + + + + +++T+NG K +S+L L++G +
Sbjct: 29 QTQSAEQQNVVNINTADAEALAKALNGVGLKKAEAIIEFRTTNGPFKDISELALVKGIGE 88
Query: 530 KTAKK 544
KT +K
Sbjct: 89 KTVEK 93
>UniRef50_Q22SQ2 Cluster: TPR Domain containing protein; n=2;
Alveolata|Rep: TPR Domain containing protein -
Tetrahymena thermophila SB210
Length = 1558
Score = 35.1 bits (77), Expect = 2.5
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 329 RCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQW-KTSNGQVK 490
+ C + ESK ++ KI+N++N+D Q + K ++K +Q+ T+N Q+K
Sbjct: 196 KTCQREGESKTTQEISQKIVNIVNEDFQQQFSSQVYKDQIKNKEQFDNTNNHQIK 250
>UniRef50_Q4WG54 Cluster: DNA repair protein Rad7, protein; n=8;
Eurotiomycetidae|Rep: DNA repair protein Rad7, protein -
Aspergillus fumigatus (Sartorya fumigata)
Length = 642
Score = 34.7 bits (76), Expect = 3.3
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 329 RCCYQNLESKYSESQKVKILNVINDDS--QTLSRFDIAKSRLKKFKQWKTSNGQVKTLSD 502
R +Q L S+ ES K+ L+ DD +TL R A RLK + WK + ++T+S
Sbjct: 363 RRLFQKLGSQL-ESLKLSNLDFSFDDETVETLCRNCTALKRLKLKQCWKIGSDSLRTIST 421
Query: 503 LPLIEGFTDKTAKKL 547
LP +E + T + L
Sbjct: 422 LPTLEHLSLDTIQDL 436
>UniRef50_A3I6Z7 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 154
Score = 34.3 bits (75), Expect = 4.3
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 619 HP--NLKESTIKDCKTVLTVYISVNSVCWTLINKMIMKLWSGSIIVLITPKERR-SDPDI 789
HP N+K+S I D + L + S CW L+N +L G+I+ + P+ R D DI
Sbjct: 18 HPRCNVKDSWITDAEIELGFQLPP-SYCWWLMNYGKARLNGGNILTVSQPEYRDIDDSDI 76
Query: 790 LILH 801
L +H
Sbjct: 77 LYIH 80
>UniRef50_Q22CS6 Cluster: Uncharacterized ACR, COG2106 family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Uncharacterized ACR, COG2106 family protein -
Tetrahymena thermophila SB210
Length = 1437
Score = 34.3 bits (75), Expect = 4.3
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +2
Query: 341 QNLESKYSESQKVKILNVIN-DDSQTLSRFDIAKSRLKKFKQWKTSNGQVKTLSDLP--- 508
Q +E +K K NV N DD + +S+ + SR K+ K+ K S Q + +DL
Sbjct: 48 QQIEQVQKRDKKNK--NVENQDDEKEISQSEKKLSR-KELKKLKKSQNQQQDQTDLNNSN 104
Query: 509 ---LIEGFTDKTAKKLCDSILNGPTEEVEQISNK 601
+E +DK+ KL NG ++++Q+SN+
Sbjct: 105 EDIQVESASDKSKLKLNQVQTNGKKDQIQQLSNE 138
>UniRef50_Q9Y719 Cluster: Cell wall alpha-1,3-glucan synthase mok13;
n=1; Schizosaccharomyces pombe|Rep: Cell wall
alpha-1,3-glucan synthase mok13 - Schizosaccharomyces
pombe (Fission yeast)
Length = 2358
Score = 34.3 bits (75), Expect = 4.3
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 335 CYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFK 460
CY +Y E +K NDD + FD AK LK FK
Sbjct: 522 CYALASDQYPELPVIKAYQGCNDDWNIMDHFDFAKPELKMFK 563
>UniRef50_UPI0000E25EAC Cluster: PREDICTED: glypican 4; n=1; Pan
troglodytes|Rep: PREDICTED: glypican 4 - Pan troglodytes
Length = 454
Score = 33.9 bits (74), Expect = 5.7
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 323 GSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQW--KTSNGQVKTL 496
GS CC Q +E KYS K +V+++ L + SR KKF ++ + K+L
Sbjct: 63 GSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQA--VFASRYKKFDEFFKELLENAEKSL 120
Query: 497 SDL 505
+D+
Sbjct: 121 NDM 123
>UniRef50_Q8DV80 Cluster: Putative competence protein; n=1;
Streptococcus mutans|Rep: Putative competence protein -
Streptococcus mutans
Length = 225
Score = 33.9 bits (74), Expect = 5.7
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 374 KVKILNVINDDSQTLSRFDIAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTDKTAKKLCD 553
KV + D QT+S I + + + ++ +NG K++ DL I G DKT +KL D
Sbjct: 163 KVNLNTATLADLQTIS--GIGEKKAQDILDYREANGGFKSVDDLKNISGIGDKTFEKLKD 220
Query: 554 SI 559
+
Sbjct: 221 LV 222
>UniRef50_Q88VD0 Cluster: ComE operon protein 1; n=2;
Lactobacillales|Rep: ComE operon protein 1 -
Lactobacillus plantarum
Length = 241
Score = 33.9 bits (74), Expect = 5.7
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 353 SKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTDK 532
S ++ + KV + QTLS I + + +K ++ +G KT+ DL + GF +K
Sbjct: 173 SDHAATDKVNLNTADVAALQTLS--GIGQKKAEKIIDYRQQHGNFKTIDDLKNVSGFGEK 230
Query: 533 TAKKLCDSI 559
T K D +
Sbjct: 231 TVVKYKDQL 239
>UniRef50_A2GK26 Cluster: Putative uncharacterized protein; n=35;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 625
Score = 33.9 bits (74), Expect = 5.7
Identities = 35/162 (21%), Positives = 73/162 (45%)
Frame = -1
Query: 776 DLLSFGVINTIILPLHNFIIILFISVQQTELTDIYTVNTVLQSLIVLSFKFGCNIDLLFY 597
DLL+ ++N I L N ++ + ++ T L +Y + TVL + + + L+ Y
Sbjct: 147 DLLTV-LVNYFITVLMNDLLTVLMNYFITVL--MYDLLTVLVNYFITVLMYDLLTVLMNY 203
Query: 596 LIFVQLLQWVHLIYCHRVXXXXXXXXXXLKVNQIGSSLDHCLFSIV*TFLILTLLYQTLT 417
I V + + ++ + + L +N + L + L +++ + I L+Y LT
Sbjct: 204 FITVLMYDLLTVLMNYFITVLMYDLLTVL-MNYFITVLMYDLLTVLVNYFITVLMYDLLT 262
Query: 416 MFENHH*LHLVFSLFDFPSIYFPSFDNNIANHLLTYSSKYFV 291
+ N+ + ++D ++ F+ + N LLT YF+
Sbjct: 263 VLMNYF---ITVLMYDLLTVLMNYFNTVLMNDLLTVLVNYFI 301
>UniRef50_O75487 Cluster: Glypican-4 precursor; n=56;
Euteleostomi|Rep: Glypican-4 precursor - Homo sapiens
(Human)
Length = 556
Score = 33.9 bits (74), Expect = 5.7
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 323 GSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQW--KTSNGQVKTL 496
GS CC Q +E KYS K +V+++ L + SR KKF ++ + K+L
Sbjct: 63 GSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQA--VFASRYKKFDEFFKELLENAEKSL 120
Query: 497 SDL 505
+D+
Sbjct: 121 NDM 123
>UniRef50_Q5XJP8 Cluster: TLC domain containing 1; n=3;
Clupeocephala|Rep: TLC domain containing 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 251
Score = 33.5 bits (73), Expect = 7.5
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = -1
Query: 788 ISGSDLLSFGVINTIILPLHNFIIILFISVQQTELTDIYTVNTVLQSLIVLSFKFGCNID 609
++G+ + F +N++ L H +++ V + L IYTVN VL + ++F+ G
Sbjct: 139 VAGAVVALFVEVNSVFL--HTRLLLNLAKVAHSSL--IYTVNKVLNVVTYVTFRLGAQFY 194
Query: 608 LLFYLIF 588
L +YL +
Sbjct: 195 LTWYLTY 201
>UniRef50_Q478W5 Cluster: Competence protein ComEA
helix-hairpin-helix region precursor; n=2;
Betaproteobacteria|Rep: Competence protein ComEA
helix-hairpin-helix region precursor - Dechloromonas
aromatica (strain RCB)
Length = 105
Score = 33.5 bits (73), Expect = 7.5
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 395 INDDSQTLSRFD----IAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTDKTAKKLCDSIL 562
+N ++ T+ D I S+ K ++T NG K++ DL ++GF +K+ KL +
Sbjct: 34 VNLNTATVDELDGVKGIGPSKAKAIVDYRTKNGSFKSVDDLKGVKGFGEKSIAKLRSELT 93
Query: 563 NG 568
G
Sbjct: 94 VG 95
>UniRef50_A2DFF8 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1087
Score = 33.5 bits (73), Expect = 7.5
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = -1
Query: 794 INISGSDLLSFGVINTIILPLHNFIIILFISVQQTELTDIYTVNTVLQSLIVLSFKFGCN 615
I+I+ ++ G ++I I+ ++ TE+ + T N V Q +I F F
Sbjct: 635 ISINNTNTTLSGATRSLIFNSFYTKIVDLVNQTSTEIVEASTSNVVNQPIIYFCFHFIFF 694
Query: 614 IDLLFYLIFVQLLQ 573
I ++ YL+++ +LQ
Sbjct: 695 ILIIIYLVYIFMLQ 708
>UniRef50_Q6D8B8 Cluster: Putative phage-related reverse
transcriptase/maturase family protein; n=1;
Pectobacterium atrosepticum|Rep: Putative phage-related
reverse transcriptase/maturase family protein - Erwinia
carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 423
Score = 33.1 bits (72), Expect = 9.9
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 392 VINDDSQTLSRFDI--------AKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTDKTAKK 544
++NDD+++L D + RL K +NGQVKTL + +GF++K KK
Sbjct: 351 LVNDDNESLKVIDFYIRALILGSGCRLSKKLNGSLNNGQVKTLLKISFAKGFSNKIHKK 409
>UniRef50_A1IEZ2 Cluster: Putative uncharacterized protein
precursor; n=1; Candidatus Desulfococcus oleovorans
Hxd3|Rep: Putative uncharacterized protein precursor -
Candidatus Desulfococcus oleovorans Hxd3
Length = 466
Score = 33.1 bits (72), Expect = 9.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 359 YSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQWKTSNGQ 484
YSE + + + ++ +Q L F K+ ++K KQWK S G+
Sbjct: 52 YSEEDRPQYVILVEKATQQLFLFSFYKNSIRKEKQWKCSTGE 93
>UniRef50_Q381L4 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 173
Score = 33.1 bits (72), Expect = 9.9
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 479 HCLFSIV*TFLILTLLYQTL-TMFENHH*LHLVFSLFDFPSIYFPSFDNNIANHLL 315
HC+ S+ FL+ + L T+F HH H SLF + FPS I+ LL
Sbjct: 112 HCVVSLPAFFLLFVYCFFFLITLFHRHHQCHHCISLFVCVVLPFPSGKPQISQRLL 167
>UniRef50_A7SAG0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 580
Score = 33.1 bits (72), Expect = 9.9
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 380 KILNVIND-DSQTLSRFD-IAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTDKTA 538
++L V+N D + L + I + R + QW+ +G + + DL +EGFT K A
Sbjct: 511 ELLTVLNTGDVKELKKLQAIGEKRAQLIVQWRQLHGPLAKVQDLANVEGFTQKMA 565
>UniRef50_Q8TII6 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina acetivorans|Rep: Putative uncharacterized
protein - Methanosarcina acetivorans
Length = 563
Score = 33.1 bits (72), Expect = 9.9
Identities = 24/99 (24%), Positives = 45/99 (45%)
Frame = +2
Query: 308 CRSISGSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQWKTSNGQV 487
C++ G C + + SES+K + + ++S+ D S+L + + ++
Sbjct: 124 CKNTRGQLCLLSEQKERASESEKEIPVTLEVEESEEKVEIDFLNSQLAN-RDAELKRLEI 182
Query: 488 KTLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQISNKI 604
K L I+ F D+ A D ++G EE+E + KI
Sbjct: 183 KLAESLQRIKEFEDRVAGN--DREISGLREELEAGTGKI 219
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,240,848
Number of Sequences: 1657284
Number of extensions: 14609940
Number of successful extensions: 35739
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 34262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35727
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -