Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E12
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640...    29   5.0  
04_01_0288 + 3824337-3826385                                           29   6.7  

>11_04_0474 +
           18162538-18163731,18163800-18163855,18163951-18164011,
           18164107-18165495,18166024-18166635,18166706-18166852,
           18166941-18167209,18167322-18167412,18167500-18167757,
           18168376-18168450,18168937-18168945
          Length = 1386

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = +2

Query: 239 HIFDTFWCSXXXXXXXXXXXXLNCRSISGS----RCCYQNLESKYSES 370
           H+ D FWC             + CRS  G+    R C++NL+  + ES
Sbjct: 331 HVLDVFWC---MIQLLRDPILMFCRSFEGACTRLRTCFENLKPLFPES 375


>04_01_0288 + 3824337-3826385
          Length = 682

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 407 SQTLSRFDIAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTDKTAKKLCDSILNGP 571
           S  + ++++  S   K  +  TS+   KTL+DL  + GF D    + C S L  P
Sbjct: 381 SGRMGQYNMLHSCYHKITKATTSHHWFKTLNDLSTLVGFADWLDMQHCSSNLEIP 435


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,381,913
Number of Sequences: 37544
Number of extensions: 347960
Number of successful extensions: 731
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)