Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E12
         (899 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.44 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   1.8  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   7.2  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   7.2  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   9.6  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 27.9 bits (59), Expect = 0.44
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 314 SISGSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKK 454
           S + ++C  + L+++    + +KIL  +   S + S+ DIAK+ LKK
Sbjct: 356 SENAAQCFEKVLKAQPGNYETMKILGSLYATSSSQSKRDIAKNHLKK 402


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 121  TNVFALLTYIINIYKVQAC 177
            +N+F L  Y++ IYKV+ C
Sbjct: 1249 SNMFELSDYLVGIYKVKDC 1267


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 468 FHCLNFFNLDFAISNLDN 415
           FHC NF +LD A+ +  +
Sbjct: 368 FHCSNFISLDEAVCSFSS 385


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 277  NKLYRTPKCIKNVVIGCTYLL 215
            N L +TP C+K  V G   LL
Sbjct: 964  NVLVQTPSCVKITVFGLAKLL 984


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 688 SVCWTLINKMIMKLWSGSII 747
           S CW+   K++   WS SI+
Sbjct: 335 SGCWSRARKLVAAAWSFSIL 354


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,549
Number of Sequences: 2352
Number of extensions: 17834
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)