Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E12
         (899 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017166-1|AAH17166.1|  556|Homo sapiens glypican 4 protein.           34   0.81 
AY358507-1|AAQ88871.1|  556|Homo sapiens glypican 4 protein.           34   0.81 
AY052833-1|AAL11018.1|  556|Homo sapiens glypican-4 protein.           34   0.81 
AL109623-1|CAB86664.2|  556|Homo sapiens glypican 4 protein.           34   0.81 
AL034400-1|CAI42076.1|  556|Homo sapiens glypican 4 protein.           34   0.81 
AF064826-1|AAC31899.1|  556|Homo sapiens glypican 4 protein.           34   0.81 
AF030186-1|AAC69991.1|  556|Homo sapiens glypican-4 protein.           34   0.81 
AF283663-1|AAK73361.1|  357|Homo sapiens pannexin 1 protein.           31   4.3  
Z32770-1|CAA83662.1|  472|Homo sapiens CD36 protein.                   30   10.0 
S67532-1|AAD13993.1|  472|Homo sapiens CD36 protein.                   30   10.0 
M98399-1|AAA58413.1|  472|Homo sapiens antigen CD36 protein.           30   10.0 
M98398-1|AAA58412.1|  472|Homo sapiens antigen CD36 protein.           30   10.0 
M24795-1|AAA35534.1|  472|Homo sapiens protein ( Human CD36 anti...    30   10.0 
L06850-1|AAA16068.1|  472|Homo sapiens antigen CD36 protein.           30   10.0 
BC008406-1|AAH08406.1|  472|Homo sapiens CD36 molecule (thrombos...    30   10.0 

>BC017166-1|AAH17166.1|  556|Homo sapiens glypican 4 protein.
          Length = 556

 Score = 33.9 bits (74), Expect = 0.81
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 323 GSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQW--KTSNGQVKTL 496
           GS CC Q +E KYS   K    +V+++    L    +  SR KKF ++  +      K+L
Sbjct: 63  GSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQA--VFASRYKKFDEFFKELLENAEKSL 120

Query: 497 SDL 505
           +D+
Sbjct: 121 NDM 123


>AY358507-1|AAQ88871.1|  556|Homo sapiens glypican 4 protein.
          Length = 556

 Score = 33.9 bits (74), Expect = 0.81
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 323 GSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQW--KTSNGQVKTL 496
           GS CC Q +E KYS   K    +V+++    L    +  SR KKF ++  +      K+L
Sbjct: 63  GSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQA--VFASRYKKFDEFFKELLENAEKSL 120

Query: 497 SDL 505
           +D+
Sbjct: 121 NDM 123


>AY052833-1|AAL11018.1|  556|Homo sapiens glypican-4 protein.
          Length = 556

 Score = 33.9 bits (74), Expect = 0.81
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 323 GSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQW--KTSNGQVKTL 496
           GS CC Q +E KYS   K    +V+++    L    +  SR KKF ++  +      K+L
Sbjct: 63  GSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQA--VFASRYKKFDEFFKELLENAEKSL 120

Query: 497 SDL 505
           +D+
Sbjct: 121 NDM 123


>AL109623-1|CAB86664.2|  556|Homo sapiens glypican 4 protein.
          Length = 556

 Score = 33.9 bits (74), Expect = 0.81
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 323 GSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQW--KTSNGQVKTL 496
           GS CC Q +E KYS   K    +V+++    L    +  SR KKF ++  +      K+L
Sbjct: 63  GSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQA--VFASRYKKFDEFFKELLENAEKSL 120

Query: 497 SDL 505
           +D+
Sbjct: 121 NDM 123


>AL034400-1|CAI42076.1|  556|Homo sapiens glypican 4 protein.
          Length = 556

 Score = 33.9 bits (74), Expect = 0.81
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 323 GSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQW--KTSNGQVKTL 496
           GS CC Q +E KYS   K    +V+++    L    +  SR KKF ++  +      K+L
Sbjct: 63  GSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQA--VFASRYKKFDEFFKELLENAEKSL 120

Query: 497 SDL 505
           +D+
Sbjct: 121 NDM 123


>AF064826-1|AAC31899.1|  556|Homo sapiens glypican 4 protein.
          Length = 556

 Score = 33.9 bits (74), Expect = 0.81
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 323 GSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQW--KTSNGQVKTL 496
           GS CC Q +E KYS   K    +V+++    L    +  SR KKF ++  +      K+L
Sbjct: 63  GSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQA--VFASRYKKFDEFFKELLENAEKSL 120

Query: 497 SDL 505
           +D+
Sbjct: 121 NDM 123


>AF030186-1|AAC69991.1|  556|Homo sapiens glypican-4 protein.
          Length = 556

 Score = 33.9 bits (74), Expect = 0.81
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 323 GSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQW--KTSNGQVKTL 496
           GS CC Q +E KYS   K    +V+++    L    +  SR KKF ++  +      K+L
Sbjct: 63  GSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQA--VFASRYKKFDEFFKELLENAEKSL 120

Query: 497 SDL 505
           +D+
Sbjct: 121 NDM 123


>AF283663-1|AAK73361.1|  357|Homo sapiens pannexin 1 protein.
          Length = 357

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -1

Query: 758 VINTIILPLHNFIIILFISVQQTELTDIYTVNTVLQSLIVLSFKFGCNIDLLFYLIFVQ 582
           VIN ++  L   +++  + V   + TD+  V  +L + +VL FK     DL  Y +F++
Sbjct: 213 VINLVVYVLLAPVVVYTLFVPFRQKTDVLKVYEILPTFVVLHFKSEGYNDLSLYNLFLE 271


>Z32770-1|CAA83662.1|  472|Homo sapiens CD36 protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +2

Query: 488 KTLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQISNKIKGQYYIQI 628
           +T  D+  I GFT + AK+L  ++L  P+E+++ + N +K  Y + I
Sbjct: 368 RTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKN-LKRNYIVPI 413


>S67532-1|AAD13993.1|  472|Homo sapiens CD36 protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +2

Query: 488 KTLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQISNKIKGQYYIQI 628
           +T  D+  I GFT + AK+L  ++L  P+E+++ + N +K  Y + I
Sbjct: 368 RTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKN-LKRNYIVPI 413


>M98399-1|AAA58413.1|  472|Homo sapiens antigen CD36 protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +2

Query: 488 KTLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQISNKIKGQYYIQI 628
           +T  D+  I GFT + AK+L  ++L  P+E+++ + N +K  Y + I
Sbjct: 368 RTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKN-LKRNYIVPI 413


>M98398-1|AAA58412.1|  472|Homo sapiens antigen CD36 protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +2

Query: 488 KTLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQISNKIKGQYYIQI 628
           +T  D+  I GFT + AK+L  ++L  P+E+++ + N +K  Y + I
Sbjct: 368 RTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKN-LKRNYIVPI 413


>M24795-1|AAA35534.1|  472|Homo sapiens protein ( Human CD36 antigen
           mRNA, complete cds. ).
          Length = 472

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +2

Query: 488 KTLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQISNKIKGQYYIQI 628
           +T  D+  I GFT + AK+L  ++L  P+E+++ + N +K  Y + I
Sbjct: 368 RTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKN-LKRNYIVPI 413


>L06850-1|AAA16068.1|  472|Homo sapiens antigen CD36 protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +2

Query: 488 KTLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQISNKIKGQYYIQI 628
           +T  D+  I GFT + AK+L  ++L  P+E+++ + N +K  Y + I
Sbjct: 368 RTYLDIQPITGFTLQFAKRLQVNLLVKPSEKIQVLKN-LKRNYIVPI 413


>BC008406-1|AAH08406.1|  472|Homo sapiens CD36 molecule
           (thrombospondin receptor) protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +2

Query: 488 KTLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQISNKIKGQYYIQI 628
           +T  D+  I GFT + AK+L  ++L  P+E+++ + N +K  Y + I
Sbjct: 368 RTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKN-LKRNYIVPI 413


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,190,324
Number of Sequences: 237096
Number of extensions: 2096456
Number of successful extensions: 3937
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3933
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)