Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E11
         (867 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 657 KXILNLEVHSGGPESTVRWIYHRQRGKQ 574
           K ++++E H  G E T+ W    QRG Q
Sbjct: 183 KVVIDVENHIEGNEVTLHWHGVWQRGSQ 210


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 657 KXILNLEVHSGGPESTVRWIYHRQRGKQ 574
           K ++++E H  G E T+ W    QRG Q
Sbjct: 183 KVVIDVENHIEGNEVTLHWHGVWQRGSQ 210


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 461 LHFYLSWLKDQTQ 499
           LHF+ SWLK + +
Sbjct: 414 LHFHASWLKSKKE 426


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 461 LHFYLSWLKDQTQ 499
           LHF+ SWLK + +
Sbjct: 421 LHFHASWLKSKKE 433


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 359 LNLLNRQDEF-VQHMTARIIAKLACWHPQLMDKSDLHFYLSW 481
           LN LN+  E     +T   +  L  W   L +K+D  +Y+S+
Sbjct: 391 LNPLNKGTEADSSFVTLPQLHSLDEWDDTLKEKADFQYYVSY 432


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,955
Number of Sequences: 336
Number of extensions: 4106
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)