Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_E10
(887 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 241 1e-64
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 129 6e-31
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 117 2e-27
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 81 2e-16
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 66 6e-12
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 64 3e-11
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 60 3e-10
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 41 2e-04
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 40 6e-04
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.22
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.38
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 28 2.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.6
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 4.7
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 27 4.7
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 26 6.2
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc... 26 8.2
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 26 8.2
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 241 bits (589), Expect = 1e-64
Identities = 122/182 (67%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Frame = +1
Query: 136 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 315
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 316 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEGSPQPXGQQREDDP 495
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTE P RE
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPK-SNREKMT 120
Query: 496 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRT-IYEGYALPHAILRLDL 672
+ +A L++ + H IYEGYALPHAI+RLDL
Sbjct: 121 QIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDL 180
Query: 673 AG 678
AG
Sbjct: 181 AG 182
Score = 192 bits (469), Expect = 4e-50
Identities = 97/134 (72%), Positives = 103/134 (76%)
Frame = +2
Query: 425 PRNTPSCSLRAPLNPXANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 604
P P APLNP +NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 98 PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGD 157
Query: 605 GVSHTVPSTRDTHSPTPSCVWTWPGRDLTDYLMKILTERGXSFTTTXEREIVRDIKEKLC 784
GV+HTVP P GRDLTDYLMKIL ERG +F+TT EREIVRDIKEKLC
Sbjct: 158 GVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLC 217
Query: 785 YVALDFEQEMATAA 826
YVALDFEQE+ TAA
Sbjct: 218 YVALDFEQELQTAA 231
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 129 bits (311), Expect = 6e-31
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 7/182 (3%)
Frame = +1
Query: 154 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 333
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 334 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEGSPQPXGQQREDDPDHVRN 510
+ PIE GI+ NW DME+IW + + + +L PEEHP+LLTE P + +E ++
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTE-PPLANIRNKEKIAEYFYE 130
Query: 511 IQH--ARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRT-IYEGYALPHAILRLDL 672
+ A P AL R+ G+ C L H IY+G+++P AI + ++
Sbjct: 131 TLNVPALSFSLQPVLALYASART-----TGIVLECGDGLTHSVPIYDGFSIPSAIQQEEI 185
Query: 673 AG 678
G
Sbjct: 186 GG 187
Score = 115 bits (276), Expect = 1e-26
Identities = 58/130 (44%), Positives = 78/130 (60%)
Frame = +2
Query: 425 PRNTPSCSLRAPLNPXANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 604
P P PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GD
Sbjct: 103 PEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGD 162
Query: 605 GVSHTVPSTRDTHSPTPSCVWTWPGRDLTDYLMKILTERGXSFTTTXEREIVRDIKEKLC 784
G++H+VP P+ GRD+TDYL L + G ++ E+EIVR+IKEK C
Sbjct: 163 GLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCC 222
Query: 785 YVALDFEQEM 814
YVA DF E+
Sbjct: 223 YVASDFRSEI 232
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 117 bits (282), Expect = 2e-27
Identities = 60/127 (47%), Positives = 77/127 (60%)
Frame = +2
Query: 425 PRNTPSCSLRAPLNPXANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 604
PR P+NP ANREKM + MFE + +YVAIQAVLSLYA G ++G+V+DSGD
Sbjct: 98 PRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGD 157
Query: 605 GVSHTVPSTRDTHSPTPSCVWTWPGRDLTDYLMKILTERGXSFTTTXEREIVRDIKEKLC 784
GV+H VP GRD T YL+ +L +G +F T + E VR++KEKLC
Sbjct: 158 GVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLC 217
Query: 785 YVALDFE 805
YV+ D E
Sbjct: 218 YVSYDLE 224
Score = 103 bits (248), Expect = 3e-23
Identities = 48/117 (41%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
Frame = +1
Query: 142 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 315
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 316 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEGSPQPXGQQRE 486
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P + +
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREK 118
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 81.4 bits (192), Expect = 2e-16
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Frame = +2
Query: 458 PLNPXANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVS 613
PLNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+
Sbjct: 132 PLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVT 191
Query: 614 HTVPSTRDTHSPTPSCVWTWPGRDLTDYLMKILTERGXSFTTTXEREIVRDIKEKLCYVA 793
H +P + GRD+T ++ +L +R ++ E IKE+ CYV
Sbjct: 192 HIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAE---RIKEECCYVC 248
Query: 794 LDFEQEMA 817
D +E +
Sbjct: 249 PDIVKEFS 256
Score = 74.9 bits (176), Expect = 1e-14
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 24/136 (17%)
Frame = +1
Query: 154 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 282
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 283 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 441
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 442 LLTEGSPQPXGQQRED 489
LLTE P + RE+
Sbjct: 127 LLTEPPLNPP-ENREN 141
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 66.1 bits (154), Expect = 6e-12
Identities = 37/110 (33%), Positives = 58/110 (52%)
Frame = +1
Query: 139 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 318
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 319 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEGSPQP 468
G + +K I +G V NWD +W + +L+ P EHP+L+TE P
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNP 110
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 464 NPXANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 601
NP NR K + MFE+ PA Y+A Q + +ASG+ T ++D G
Sbjct: 109 NPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIG 154
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 64.1 bits (149), Expect = 3e-11
Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +1
Query: 154 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 333
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR----KLSRTSTLVGNDTLIEVGSRSI 82
Query: 334 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEGSPQP 468
+ P E +++NWD ME++ +TF +L + EHP+ +TE P
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANP 127
Score = 60.9 bits (141), Expect = 2e-10
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Frame = +2
Query: 437 PSCSLRAPLNPXANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGV 610
P C NP R MT+++FE +N P++ I + S Y + + ++GIVL+ G+
Sbjct: 117 PICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAA 176
Query: 611 SHTVPSTRDTHSPTPSCVWTWPGRDLTDYLMKILTERGXSFTTTXEREIVRDIKEKLCYV 790
SH +P + + +W G + YL+K+ + SF + C+V
Sbjct: 177 SHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSFPIKMLPSQAELLMHDHCHV 236
Query: 791 ALDFEQEMATA 823
+ D+ ++A A
Sbjct: 237 SSDYTHDIAHA 247
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 60.5 bits (140), Expect = 3e-10
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Frame = +1
Query: 139 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 318
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 319 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEGS--PQPXGQQ 480
I + +K +GI+ +W+ W +L+V P E+ +++TE S PQ QQ
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQ 119
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +2
Query: 464 NPXANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 625
NP + R+++ + FE + PA Y+ QAV +A+ ++T +++D G + P
Sbjct: 112 NPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTP 165
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = +2
Query: 584 IVLDSGDGVSHTVPSTRDTHSPTPSCVWTWPGRDLTDYLMKILTERGXSFTTTXEREIVR 763
+V+DSG +H +P + G+ LT+YL ++++ R + E IV
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYR--KYNMMEETYIVN 216
Query: 764 DIKEKLCYVALDFEQEM 814
+IKE +CYV+ +F+++M
Sbjct: 217 EIKESVCYVSQNFKEDM 233
Score = 28.3 bits (60), Expect = 1.5
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = +1
Query: 154 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 333
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 334 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTE 453
++ H G + +W +W N + P ++ +LLT+
Sbjct: 58 QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQ 101
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 39.5 bits (88), Expect = 6e-04
Identities = 27/100 (27%), Positives = 43/100 (43%)
Frame = +2
Query: 476 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPSTRDTHSPTP 655
+RE TQ FE P +A + ++ LYA G G+V+D G + P T
Sbjct: 161 DRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTA 220
Query: 656 SCVWTWPGRDLTDYLMKILTERGXSFTTTXEREIVRDIKE 775
+ GR +T +L +L E + ++ + DI E
Sbjct: 221 TQQLPLGGRYMTQHLQNLLRESLPTLKSSGQYVSKEDITE 260
Score = 25.8 bits (54), Expect = 8.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 340 PIEHGIVTNWDDMEKIWHHTF 402
PI+ G V +W+ ++ W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 199 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 342
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -1
Query: 296 PTYESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 135
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 446 SLRAPLNPXANREK-MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 622
SL++ A R + +T +M P+M + ++ + G VL SGD V+ +
Sbjct: 1779 SLKSSEEDFALRTRCVTSLMLVNSKHPSMSALCRFIIYKSVTMLQNGEVLKSGDYVTEFI 1838
Query: 623 PSTRDTHSPTP 655
P+ D H P
Sbjct: 1839 PALLDMHVHIP 1849
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 299 SPTYESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 183
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 26.6 bits (56), Expect = 4.7
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -1
Query: 683 RDPAKSRR----RMAWGSAYPS*MVRCGRHRRRSPARYRWYDR-TRTARAR 546
R P RR R +GS PS H+ RSP R R DR +R++R+R
Sbjct: 111 RTPRHHRRSYSPRSDYGSRSPSPHSSVDSHQSRSPVRSRDRDRSSRSSRSR 161
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 617 TVPSTRDTHSPTPSCVWTWPGRDLTDYLMKILTERG 724
T+ S D P P + P R+L +M ++TE G
Sbjct: 173 TMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMG 208
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 663 TQDGVGECVSLVDGTVWETPSPESSTIPVVRPDAY 559
T DGV + + L DG WE+ S S + + R Y
Sbjct: 288 TNDGVYDWMLLNDGKGWESSSSHFSVVAMKRRKNY 322
>SPCP1E11.04c |pal1||membrane associated protein Pal1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 193 NRPCTYRSHCLLPTRQLP 140
NRP YRSH + TR+ P
Sbjct: 323 NRPSNYRSHSSMGTRRSP 340
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 25.8 bits (54), Expect = 8.2
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 633 GIRTPPRHPASGLGRVAIS 689
GI+ PP+HP S + +S
Sbjct: 538 GIKNPPKHPLSSTAEIVLS 556
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,733,288
Number of Sequences: 5004
Number of extensions: 84861
Number of successful extensions: 299
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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