Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E06
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1006 + 8528508-8529285,8529376-8529544,8530179-8530445,853...    29   5.1  

>07_01_1006 + 8528508-8529285,8529376-8529544,8530179-8530445,
            8530533-8530878,8530964-8531101,8531197-8531322,
            8531422-8531634,8531721-8531863,8531891-8532009,
            8532099-8532295,8532379-8532729,8532811-8533395
          Length = 1143

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 179  WFLTKFVTTFLPSLFEMRVSGVII 108
            WF++ F+  F+  + EMR SGV I
Sbjct: 957  WFMSLFICIFVTGILEMRWSGVAI 980


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,160,209
Number of Sequences: 37544
Number of extensions: 342102
Number of successful extensions: 626
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)