BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_E06 (912 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF136170-1|AAP97260.1| 63|Homo sapiens cytochrome c oxidase VI... 50 2e-05 X16560-1|CAA34559.1| 63|Homo sapiens protein ( Human COX VIIc ... 47 1e-04 BT007098-1|AAP35762.1| 63|Homo sapiens cytochrome c oxidase su... 47 1e-04 BC007498-1|AAH07498.1| 63|Homo sapiens cytochrome c oxidase su... 47 1e-04 BC001005-1|AAH01005.1| 63|Homo sapiens cytochrome c oxidase su... 47 1e-04 AF067639-1|AAC73062.1| 63|Homo sapiens cytochrome c oxidase su... 47 1e-04 BC019928-1|AAH19928.1| 201|Homo sapiens LPHN1 protein protein. 34 0.82 AK022001-1|BAB13950.1| 201|Homo sapiens protein ( Homo sapiens ... 34 0.82 >AF136170-1|AAP97260.1| 63|Homo sapiens cytochrome c oxidase VIIc protein. Length = 63 Score = 49.6 bits (113), Expect = 2e-05 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Frame = +1 Query: 148 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 303 R T+ VR +H G PG+NLPF + N+++L +Y GSG +AP+ I RH Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWRLLAMMTVYFGSGFAAPFFIVRH 58 >X16560-1|CAA34559.1| 63|Homo sapiens protein ( Human COX VIIc gene for subunit VIIc of cytochrome c oxidase (EC 1.9.3.1). ). Length = 63 Score = 46.8 bits (106), Expect = 1e-04 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +1 Query: 148 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 303 R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RH Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRH 58 >BT007098-1|AAP35762.1| 63|Homo sapiens cytochrome c oxidase subunit VIIc protein. Length = 63 Score = 46.8 bits (106), Expect = 1e-04 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +1 Query: 148 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 303 R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RH Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRH 58 >BC007498-1|AAH07498.1| 63|Homo sapiens cytochrome c oxidase subunit VIIc protein. Length = 63 Score = 46.8 bits (106), Expect = 1e-04 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +1 Query: 148 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 303 R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RH Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRH 58 >BC001005-1|AAH01005.1| 63|Homo sapiens cytochrome c oxidase subunit VIIc protein. Length = 63 Score = 46.8 bits (106), Expect = 1e-04 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +1 Query: 148 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 303 R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RH Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRH 58 >AF067639-1|AAC73062.1| 63|Homo sapiens cytochrome c oxidase subunit VIIc precursor protein. Length = 63 Score = 46.8 bits (106), Expect = 1e-04 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +1 Query: 148 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 303 R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RH Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRH 58 >BC019928-1|AAH19928.1| 201|Homo sapiens LPHN1 protein protein. Length = 201 Score = 33.9 bits (74), Expect = 0.82 Identities = 17/48 (35%), Positives = 19/48 (39%) Frame = -2 Query: 803 PXPNDRAQRXSEXGSGRGPIRKPPFPXRWPIH*CRKNXPHLPLNLKHK 660 P P R S P PFP RWP+H C P L + HK Sbjct: 109 PQPPSLNSRGSIAPGHPSPAPALPFPQRWPLHLCSDLSPSLCPSFSHK 156 >AK022001-1|BAB13950.1| 201|Homo sapiens protein ( Homo sapiens cDNA FLJ11939 fis, clone HEMBB1000592. ). Length = 201 Score = 33.9 bits (74), Expect = 0.82 Identities = 17/48 (35%), Positives = 19/48 (39%) Frame = -2 Query: 803 PXPNDRAQRXSEXGSGRGPIRKPPFPXRWPIH*CRKNXPHLPLNLKHK 660 P P R S P PFP RWP+H C P L + HK Sbjct: 109 PQPPSLNSRGSIAPGHPSPAPALPFPQRWPLHLCSDLSPSLCPSFSHK 156 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 105,419,004 Number of Sequences: 237096 Number of extensions: 1911598 Number of successful extensions: 2987 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2879 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2987 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 11825849886 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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