Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_E03
(878 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40; Eutele... 134 2e-30
UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4; Pezizom... 121 2e-26
UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9; Eukar... 119 9e-26
UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal ... 114 3e-24
UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29; Fung... 111 2e-23
UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90; Eukary... 107 5e-22
UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A, cyt... 71 4e-20
UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing prote... 99 1e-19
UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago ma... 86 1e-15
UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2; Fungi/M... 79 1e-13
UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila ... 75 2e-12
UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe... 69 1e-10
UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4; Archae... 65 3e-09
UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18; Archa... 63 1e-08
UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10; Eurya... 63 1e-08
UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila ... 61 4e-08
UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1; Methanobre... 60 7e-08
UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12; Archa... 58 3e-07
UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga... 58 4e-07
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 45 0.003
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 44 0.005
UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.19
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 37 0.78
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 36 1.8
UniRef50_A0RXE5 Cluster: Methionyl-tRNA synthetase; n=3; Thermop... 35 3.1
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
>UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40;
Euteleostomi|Rep: 60S ribosomal protein L37 - Homo
sapiens (Human)
Length = 97
Score = 134 bits (325), Expect = 2e-30
Identities = 61/94 (64%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Frame = +1
Query: 79 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 258
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 259 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 357
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L37 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 158
Score = 121 bits (292), Expect = 2e-26
Identities = 53/81 (65%), Positives = 60/81 (74%)
Frame = +1
Query: 85 KGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 264
KGTSSFGKR NK+HTLCRRCGR S+HIQKS CA CGYP+AK+R Y+WS KA
Sbjct: 69 KGTSSFGKRHNKSHTLCRRCGRRSFHIQKSTCANCGYPSAKVRKYNWSEKAKRRKTTGTG 128
Query: 265 XMRHLKIVRRRFRNGFKEGKP 327
M HLK V RRF+NGF+ G P
Sbjct: 129 RMSHLKDVHRRFKNGFQVGTP 149
>UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9;
Eukaryota|Rep: 60S ribosomal protein L37-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 95
Score = 119 bits (287), Expect = 9e-26
Identities = 56/94 (59%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +1
Query: 79 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 258
M KGT SFGKRRNK+HTLC RCGR S+HIQKS+C+ C YPAA+ R+Y+WSVKA
Sbjct: 1 MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60
Query: 259 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 357
MR+L+ V RRF+ F+EG + TP KA ASS
Sbjct: 61 TGRMRYLRNVPRRFKTCFREGTQATPRNKAAASS 94
>UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal
protein L37; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L37 - Canis familiaris
Length = 124
Score = 114 bits (274), Expect = 3e-24
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +1
Query: 67 RSDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXX 246
R+ + KGTSSFGKRRNK HTLCRRCG +YH+QKS C +C YPA R Y+W KA
Sbjct: 24 RTKQDEKGTSSFGKRRNKMHTLCRRCGSKAYHLQKSTCGKCRYPAKWKRKYNWGAKAKRR 83
Query: 247 XXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 357
MRHLKIV R R+GF+ G P P + AVA+S
Sbjct: 84 NTTGTGRMRHLKIVYHRCRHGFRGGTTPKPKRAAVAAS 121
>UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29;
Fungi/Metazoa group|Rep: 60S ribosomal protein L37-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 88
Score = 111 bits (267), Expect = 2e-23
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = +1
Query: 79 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 258
M KGT SFGKR NK+HTLC RCGR S+H+QK C+ CGYP+AK RS++W+ KA
Sbjct: 1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTG 60
Query: 259 XXXMRHLKIVRRRFRNGFKEG 321
MR+LK V RRF+NGF+ G
Sbjct: 61 TGRMRYLKHVSRRFKNGFQTG 81
>UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90;
Eukaryota|Rep: 60S ribosomal protein L37 -
Caenorhabditis elegans
Length = 91
Score = 107 bits (256), Expect = 5e-22
Identities = 45/85 (52%), Positives = 57/85 (67%)
Frame = +1
Query: 79 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 258
MTKGT +FGK+ K+HTLC+RCG+SS+HIQK +CA CGY AK R+Y+W K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60
Query: 259 XXXMRHLKIVRRRFRNGFKEGKPTP 333
RHL+ V RFRNGF+ P P
Sbjct: 61 TGRTRHLRDVNARFRNGFRGTTPKP 85
>UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A,
cytosolic; n=1; Neurospora crassa|Rep: Probable
ribosomal protein L37.e.A, cytosolic - Neurospora crassa
Length = 124
Score = 70.9 bits (166), Expect(2) = 4e-20
Identities = 34/73 (46%), Positives = 41/73 (56%)
Frame = +1
Query: 136 RRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFK 315
R R S H QK CA CGYPAAK R Y+WS KA +R+L V R+F+NGF+
Sbjct: 52 RFTSRRSLHNQKKVCASCGYPAAKTRKYNWSEKAKRRKTTGTGRLRYLSTVSRKFKNGFQ 111
Query: 316 EGKPTPPKKAVAS 354
G P K VA+
Sbjct: 112 TGVPKGSKGPVAA 124
Score = 50.4 bits (115), Expect(2) = 4e-20
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 79 MTKGTSSFGKRRNKTHTLCRRCGR 150
MTKGTSSFGKR KTH LCRRCGR
Sbjct: 1 MTKGTSSFGKRHTKTHGLCRRCGR 24
>UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing protein;
n=5; Eukaryota|Rep: Ribosomal protein L37e containing
protein - Tetrahymena thermophila SB210
Length = 214
Score = 99.1 bits (236), Expect = 1e-19
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +1
Query: 82 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYH-WSVKAXXXXXXX 258
T+GT +FGKR KTHTLCRRCG+++YH QK +CA CGYP AK+R Y W K
Sbjct: 48 TRGTPAFGKRHQKTHTLCRRCGKATYHKQKLRCAACGYPDAKMRRYDGWGQKVRDRKGQG 107
Query: 259 XXXMRHLKIVRRRFRNGFKEG 321
MR++K + RR +NGF+ G
Sbjct: 108 TGRMRYMKTIARRAKNGFRSG 128
>UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago
maydis|Rep: Ribosomal protein L37 - Ustilago maydis
(Smut fungus)
Length = 125
Score = 85.8 bits (203), Expect = 1e-15
Identities = 37/68 (54%), Positives = 44/68 (64%)
Frame = +1
Query: 118 KTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRR 297
KTHT+CRRC ++H QK CA CGYPAAK+RSY W KA MR+LK V RR
Sbjct: 50 KTHTVCRRCNARAFHRQKKVCASCGYPAAKIRSYEWGQKAKRRKTTGTGRMRYLKNVSRR 109
Query: 298 FRNGFKEG 321
+NGF+ G
Sbjct: 110 AKNGFQTG 117
>UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2;
Fungi/Metazoa group|Rep: 60S RIBOSOMAL PROTEIN L37 -
Encephalitozoon cuniculi
Length = 90
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +1
Query: 79 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 258
M+KGT+SFGK+ + +CRRCGR SYH QK+ C+ CGYP K+R+ S+KA
Sbjct: 1 MSKGTASFGKKNKRNTEMCRRCGRQSYHKQKNSCSSCGYPNPKMRN-PGSIKARRRRTIG 59
Query: 259 XXXMRHLKIVRRRFRNGFKEGKP 327
MR++K R +NG K G P
Sbjct: 60 TGRMRYMKRELRAAKNGHK-GDP 81
>UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 103
Score = 75.4 bits (177), Expect = 2e-12
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +1
Query: 79 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQ 186
MTKGT+SFGKR NKTHT+CRRCG SSYH+QKSKC+Q
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQ 36
>UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe
grisea 70-15|Rep: Ribosomal protein L37 - Magnaporthe
grisea 70-15
Length = 188
Score = 69.3 bits (162), Expect = 1e-10
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +1
Query: 139 RCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKE 318
+ R S H+QK CA CGYPAAK R Y+WS KA MR+L V R+F+N F+
Sbjct: 115 KMSRRSLHVQKHTCASCGYPAAKTRKYNWSEKAKRRKTTGTGRMRYLSTVTRKFKNDFQT 174
Query: 319 GKP 327
G P
Sbjct: 175 GTP 177
>UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4;
Archaea|Rep: 50S ribosomal protein L37e - Thermoplasma
volcanium
Length = 54
Score = 64.9 bits (151), Expect = 3e-09
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +1
Query: 79 MTKGTSSFGKRRNK-THTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWS 228
M+ GT+ GK NK TH CRRCG +Y+++ +C+ CG+PA ++RSY W+
Sbjct: 1 MSNGTAVMGKINNKKTHITCRRCGHHTYNVRTKRCSHCGFPAPRIRSYKWA 51
>UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18;
Archaea|Rep: 50S ribosomal protein L37e - Pyrococcus
furiosus
Length = 62
Score = 62.9 bits (146), Expect = 1e-08
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +1
Query: 79 MTKGTSSFGKRRNK-THTLCRRCGRSSYHIQKSKCAQCGY-PAAKLRSYHWSVK 234
M GT++FGKR + TH CRRCGR SY+++K CA CG+ + +LR Y WS K
Sbjct: 1 MGSGTATFGKRNSTPTHIRCRRCGRVSYNVKKGYCAACGFGRSRRLRKYRWSKK 54
>UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L37e -
Halobacterium salinarium (Halobacterium halobium)
Length = 58
Score = 62.9 bits (146), Expect = 1e-08
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 GTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA-AKLRSYHWSVK 234
GT S GK+ THT CRRCG SYH +K C+ CG+ A AK R Y W K
Sbjct: 5 GTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGASAKRRDYEWQGK 54
>UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 78
Score = 60.9 bits (141), Expect = 4e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 79 MTKGTSSFGKRRNKTHTLCRRCGRSSYH 162
MTKGT+SFGKR NKTHT+CRRCG SSYH
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYH 28
>UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L37e - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 55
Score = 60.1 bits (139), Expect = 7e-08
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 GKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAK-LRSYHWSVK 234
GK+ KTH CRRCGR++YHI K CA CG+ +K +R Y W K
Sbjct: 2 GKKNKKTHIRCRRCGRNTYHIHKKVCASCGFGKSKRIRRYSWQNK 46
>UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12;
Archaea|Rep: 50S ribosomal protein L37e - Methanococcus
maripaludis
Length = 64
Score = 58.0 bits (134), Expect = 3e-07
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 79 MTKGTSSFGKR-RNKTHTLCRRCGRSSYHIQKSKCAQCGY-PAAKLRSYHWSVK 234
MTKGT S GK + H +CRRCGR ++H++K CA CG+ ++K++ + W K
Sbjct: 1 MTKGTPSQGKHNKGSNHIVCRRCGRRAFHVRKKVCAACGFGRSSKIKRFAWQWK 54
>UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L37e -
Caldivirga maquilingensis IC-167
Length = 61
Score = 57.6 bits (133), Expect = 4e-07
Identities = 26/40 (65%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 79 MTKGTSSFGKR-RNKTHTLCRRCGRSSYHIQKSKCAQCGY 195
MTKGT SFG+ R KTH C RCGR SY+I K CA CGY
Sbjct: 1 MTKGTPSFGRMSRGKTHIRCPRCGRHSYNIVKGYCAACGY 40
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 667 SALMNRPXRGXRRFGYWAPFRFLA 738
+ALMNRP RG RRF YWA FRFLA
Sbjct: 25 AALMNRPTRGERRFAYWALFRFLA 48
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +3
Query: 669 CINESAXARGXAVWVLGALPXPRSXTPCARSFGXG 773
CI + A AR AVWVL ALP RS T C RS G G
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCG 300
>UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 89
Score = 38.7 bits (86), Expect = 0.19
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 190 GYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKPTPPKKAVA 351
G+ + S +WSVKA MR+++ V +RF++ F+EG P+K A
Sbjct: 33 GFNFCDVISDNWSVKAIRRKTTGTGRMRYMRHVPKRFKSNFREGTEATPRKRAA 86
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 36.7 bits (81), Expect = 0.78
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1
Query: 472 DPXMIXYXDEFGQTTTKMQ 528
DP MI Y DEFGQTTT+MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2
Query: 721 APNTQTAXPRAXADSLMQ 668
APNTQTA PRA ADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_A0RXE5 Cluster: Methionyl-tRNA synthetase; n=3;
Thermoprotei|Rep: Methionyl-tRNA synthetase -
Cenarchaeum symbiosum
Length = 548
Score = 34.7 bits (76), Expect = 3.1
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +1
Query: 73 DKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHW 225
D+ +GT K + LC CGR I CA CG K S H+
Sbjct: 137 DRYVRGTCPHCKAAEQYSDLCESCGRVPEEIADPHCAICGNTPVKRSSRHY 187
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 33.1 bits (72), Expect = 9.6
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 717 GALPXPRSXTPCARSFGXGXRYXL 788
G +P PRS T ARSFG G RY L
Sbjct: 34 GDIPLPRSLTRYARSFGCGERYRL 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,759,305
Number of Sequences: 1657284
Number of extensions: 10358748
Number of successful extensions: 22178
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 21554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22170
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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