BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_E03 (878 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z83128-1|CAB05635.1| 92|Caenorhabditis elegans Hypothetical pr... 113 2e-25 Z77131-1|CAB00854.1| 91|Caenorhabditis elegans Hypothetical pr... 107 1e-23 AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical ... 32 0.62 U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical pr... 31 0.82 Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 28 7.7 >Z83128-1|CAB05635.1| 92|Caenorhabditis elegans Hypothetical protein W01D2.1 protein. Length = 92 Score = 113 bits (272), Expect = 2e-25 Identities = 47/87 (54%), Positives = 60/87 (68%) Frame = +1 Query: 79 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 258 MTKGT +FGK+ K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W K+ Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60 Query: 259 XXXMRHLKIVRRRFRNGFKEGKPTPPK 339 RHL+ V RFRNGF+EG P+ Sbjct: 61 TGRTRHLRDVNARFRNGFREGTTPKPR 87 >Z77131-1|CAB00854.1| 91|Caenorhabditis elegans Hypothetical protein C54C6.1 protein. Length = 91 Score = 107 bits (256), Expect = 1e-23 Identities = 45/85 (52%), Positives = 57/85 (67%) Frame = +1 Query: 79 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 258 MTKGT +FGK+ K+HTLC+RCG+SS+HIQK +CA CGY AK R+Y+W K+ Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60 Query: 259 XXXMRHLKIVRRRFRNGFKEGKPTP 333 RHL+ V RFRNGF+ P P Sbjct: 61 TGRTRHLRDVNARFRNGFRGTTPKP 85 >AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical protein C36C9.4 protein. Length = 671 Score = 31.9 bits (69), Expect = 0.62 Identities = 17/63 (26%), Positives = 28/63 (44%) Frame = +1 Query: 16 RLTTREFLKXLISFGLSRSDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGY 195 R + F + L+S S ++ ++ K TH C +CG+ + + KC CG Sbjct: 67 RYSNLAFKRSLLSLDESVAES-ANSIWTYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGG 123 Query: 196 PAA 204 P A Sbjct: 124 PVA 126 >U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical protein T25D1.2 protein. Length = 438 Score = 31.5 bits (68), Expect = 0.82 Identities = 17/63 (26%), Positives = 28/63 (44%) Frame = +1 Query: 16 RLTTREFLKXLISFGLSRSDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGY 195 R + F + L+S S ++ ++ K TH C +CG+ + + KC CG Sbjct: 139 RYSNLAFKRSLLSLDESVAES-ANSIWTYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGG 195 Query: 196 PAA 204 P A Sbjct: 196 PVA 198 >Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical protein C17H1.9 protein. Length = 353 Score = 28.3 bits (60), Expect = 7.7 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%) Frame = +2 Query: 110 AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 217 A+++ I+Y D +++H + F+NQ + L+ N DP Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,803,904 Number of Sequences: 27780 Number of extensions: 253179 Number of successful extensions: 492 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 488 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 492 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2213393798 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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