Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E03
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...   113   2e-25
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...   107   1e-23
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    32   0.62 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   0.82 
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score =  113 bits (272), Expect = 2e-25
 Identities = 47/87 (54%), Positives = 60/87 (68%)
 Frame = +1

Query: 79  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 258
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60

Query: 259 XXXMRHLKIVRRRFRNGFKEGKPTPPK 339
               RHL+ V  RFRNGF+EG    P+
Sbjct: 61  TGRTRHLRDVNARFRNGFREGTTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score =  107 bits (256), Expect = 1e-23
 Identities = 45/85 (52%), Positives = 57/85 (67%)
 Frame = +1

Query: 79  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 258
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGY  AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60

Query: 259 XXXMRHLKIVRRRFRNGFKEGKPTP 333
               RHL+ V  RFRNGF+   P P
Sbjct: 61  TGRTRHLRDVNARFRNGFRGTTPKP 85


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +1

Query: 16  RLTTREFLKXLISFGLSRSDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGY 195
           R +   F + L+S   S ++       ++ K    TH  C +CG+ + +    KC  CG 
Sbjct: 67  RYSNLAFKRSLLSLDESVAES-ANSIWTYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGG 123

Query: 196 PAA 204
           P A
Sbjct: 124 PVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +1

Query: 16  RLTTREFLKXLISFGLSRSDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGY 195
           R +   F + L+S   S ++       ++ K    TH  C +CG+ + +    KC  CG 
Sbjct: 139 RYSNLAFKRSLLSLDESVAES-ANSIWTYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGG 195

Query: 196 PAA 204
           P A
Sbjct: 196 PVA 198


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +2

Query: 110 AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 217
           A+++ I+Y  D +++H   + F+NQ   +   L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,803,904
Number of Sequences: 27780
Number of extensions: 253179
Number of successful extensions: 492
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)