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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E02
         (1327 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    35   0.15 
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    34   0.26 
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    32   1.0  
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    32   1.0  
AF535160-1|AAN33048.1|  468|Caenorhabditis elegans UNC-34 protein.     31   2.4  
AC025722-6|AAO12398.1|  310|Caenorhabditis elegans Uncoordinated...    31   2.4  
AC025722-5|AAO12397.1|  454|Caenorhabditis elegans Uncoordinated...    31   2.4  
Z98866-8|CAB11562.2|  425|Caenorhabditis elegans Hypothetical pr...    30   4.2  
U42841-13|AAC48170.1|  682|Caenorhabditis elegans Hypothetical p...    30   4.2  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical p...    29   5.6  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    29   5.6  

>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
            (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 44/194 (22%), Positives = 53/194 (27%), Gaps = 4/194 (2%)
 Frame = +2

Query: 551  SYP-AXXAXXLXSSPXPXXPPXXHRSAXXTXXXXXXXPGXPAAAX--QXXP-PXPPI*PX 718
            +YP +  A      P P  PP        +       P  P A    Q  P P PP  P 
Sbjct: 13   TYPESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPY 72

Query: 719  XXXXXPRHSPXCLTXXAVXXPXXLPXPLAXGXEVLPXPLXPRTSRXXXPXXXXXPPXRLV 898
                 P  +P   +      P   P P       +P P  P       P      P    
Sbjct: 73   PQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPA---PYPQHAVPAPAPYQ 129

Query: 899  RAXPXXXPXPPXHXXGXXPHLGAPXXXPSPPXSPAXXPXXPXHXXPRVXLXXHXXSLINX 1078
            +  P   P PP H     PH         PP  PA       H  PR     H       
Sbjct: 130  QQPP--PPPPPPHYPPPPPHY--------PPPPPAPHSAYIDHSAPRPAYIEHSAPPPQP 179

Query: 1079 HIXHKSPWRXPXTR 1120
                + P + P  R
Sbjct: 180  QYPQQQPPQYPQQR 193


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical protein
            R04E5.8a protein.
          Length = 997

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
 Frame = +2

Query: 824  PXPLXPRTSRXXXPXXXXXPPXRLVRAXPXXXPXP-PXHXXGXXPHLGAPXXXPSP-PXS 997
            P P  PR SR         PP R+ R  P   P P         P    P   PSP P +
Sbjct: 123  PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRN 182

Query: 998  PAXXPXXPXHXXP 1036
            P   P  P    P
Sbjct: 183  PPRTPPSPIPPPP 195


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical protein
            C08B11.5 protein.
          Length = 388

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 28/126 (22%), Positives = 33/126 (26%)
 Frame = +2

Query: 659  PGXPAAAXQXXPPXPPI*PXXXXXXPRHSPXCLTXXAVXXPXXLPXPLAXGXEVLPXPLX 838
            P  P +     PP PP         P  S           P   P P   G   +P P  
Sbjct: 264  PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP--PGMPGMPPPPP 321

Query: 839  PRTSRXXXPXXXXXPPXRLVRAXPXXXPXPPXHXXGXXPHLGAPXXXPSPPXSPAXXPXX 1018
            P             PP   +R      P PP       P +  P     PP  P+     
Sbjct: 322  PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI 381

Query: 1019 PXHXXP 1036
            P    P
Sbjct: 382  PPPPPP 387


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA binding
            protein protein.
          Length = 398

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 28/126 (22%), Positives = 33/126 (26%)
 Frame = +2

Query: 659  PGXPAAAXQXXPPXPPI*PXXXXXXPRHSPXCLTXXAVXXPXXLPXPLAXGXEVLPXPLX 838
            P  P +     PP PP         P  S           P   P P   G   +P P  
Sbjct: 274  PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP--PGMPGMPPPPP 331

Query: 839  PRTSRXXXPXXXXXPPXRLVRAXPXXXPXPPXHXXGXXPHLGAPXXXPSPPXSPAXXPXX 1018
            P             PP   +R      P PP       P +  P     PP  P+     
Sbjct: 332  PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI 391

Query: 1019 PXHXXP 1036
            P    P
Sbjct: 392  PPPPPP 397


>AF535160-1|AAN33048.1|  468|Caenorhabditis elegans UNC-34 protein.
          Length = 468

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
 Frame = +2

Query: 881  PPXRLVRAXPXXXPXPPXHXXGXXP---HLGAPXXXPSPPXSPAXXPXXPXHXXP 1036
            PP  L    P   P PP    G  P   H GAP   P PP      P  P    P
Sbjct: 203  PPVPLTSNIPQAPPAPPPPIGGIAPVNAH-GAPPPPPLPPVGAGAPPPPPPPPPP 256


>AC025722-6|AAO12398.1|  310|Caenorhabditis elegans Uncoordinated
            protein 34, isoform b protein.
          Length = 310

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
 Frame = +2

Query: 881  PPXRLVRAXPXXXPXPPXHXXGXXP---HLGAPXXXPSPPXSPAXXPXXPXHXXP 1036
            PP  L    P   P PP    G  P   H GAP   P PP      P  P    P
Sbjct: 189  PPVPLTSNIPQAPPAPPPPIGGIAPVNAH-GAPPPPPLPPVGAGAPPPPPPPPPP 242


>AC025722-5|AAO12397.1|  454|Caenorhabditis elegans Uncoordinated
            protein 34, isoform a protein.
          Length = 454

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
 Frame = +2

Query: 881  PPXRLVRAXPXXXPXPPXHXXGXXP---HLGAPXXXPSPPXSPAXXPXXPXHXXP 1036
            PP  L    P   P PP    G  P   H GAP   P PP      P  P    P
Sbjct: 189  PPVPLTSNIPQAPPAPPPPIGGIAPVNAH-GAPPPPPLPPVGAGAPPPPPPPPPP 242


>Z98866-8|CAB11562.2|  425|Caenorhabditis elegans Hypothetical protein
            Y49E10.10 protein.
          Length = 425

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 18/71 (25%), Positives = 22/71 (30%)
 Frame = +2

Query: 830  PLXPRTSRXXXPXXXXXPPXRLVRAXPXXXPXPPXHXXGXXPHLGAPXXXPSPPXSPAXX 1009
            P  P T     P     PP       P     PP           AP   P+P  +PA  
Sbjct: 175  PPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPN 234

Query: 1010 PXXPXHXXPRV 1042
            P  P +   +V
Sbjct: 235  PPAPENTTAKV 245


>U42841-13|AAC48170.1|  682|Caenorhabditis elegans Hypothetical
           protein T17H7.1 protein.
          Length = 682

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 856 GARGAGVXGXGXDFGPXREGXREXG 782
           G  G G  G G DFGP R+G R  G
Sbjct: 397 GPGGRGGRGQGPDFGPGRQGGRGQG 421


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical protein
            E02A10.2 protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 1035 GXXCXGXXGXCAGEXGGLGXXXGAPRWGXXPXXWXGGXGXXXG 907
            G  C G  G C G  GG G   G    G       GG G   G
Sbjct: 62   GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 104



 Score = 29.5 bits (63), Expect = 5.6
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 1035 GXXCXGXXGXCAGEXGGLGXXXGAPRWGXXPXXWXGGXGXXXG 907
            G  C G  G C G  GG G   G    G       GG G   G
Sbjct: 146  GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGG 188


>Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical
            protein T06E4.12 protein.
          Length = 228

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 32/118 (27%), Positives = 36/118 (30%)
 Frame = +2

Query: 659  PGXPAAAXQXXPPXPPI*PXXXXXXPRHSPXCLTXXAVXXPXXLPXPLAXGXEVLPXPLX 838
            P   A A    PP PP+ P      PR          +  P   P P+     VL  P  
Sbjct: 103  PVLAAPAPFLAPPVPPVAPIVSAFAPR--------PVLAAPAFAPAPILAPRPVLAAPAI 154

Query: 839  PRTSRXXXPXXXXXPPXRLVRAXPXXXPXPPXHXXGXXPHLGAPXXXPSPPXSPAXXP 1012
            P  +    P     P  R V A P      P       P L AP      P  PA  P
Sbjct: 155  PAFA----PAPLLAP--RPVLAAPAIPAFAPAPIIAPRPVLAAPAIPAFAPAVPAAIP 206


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical protein
            ZK643.8 protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 1035 GXXCXGXXGXCAGEXGGLGXXXGAPRWGXXPXXWXGGXGXXXG 907
            G  C G  G C G  GG G   G    G       GG G   G
Sbjct: 80   GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122



 Score = 29.5 bits (63), Expect = 5.6
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 1035 GXXCXGXXGXCAGEXGGLGXXXGAPRWGXXPXXWXGGXGXXXG 907
            G  C G  G C G  GG G   G    G       GG G   G
Sbjct: 100  GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/52 (30%), Positives = 17/52 (32%)
 Frame = -2

Query: 1035 GXXCXGXXGXCAGEXGGLGXXXGAPRWGXXPXXWXGGXGXXXGXARTXRXGG 880
            G  C G  G C G  GG G   G    G       G  G   G +     GG
Sbjct: 107  GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = -2

Query: 1035 GXXCXGXXGXCAGEXGGLGXXXGAPRWGXXPXXWXGGXGXXXGXARTXRXGG 880
            G  C G  G C G  GG G   G    G       GG     G       GG
Sbjct: 114  GGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGG 165


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical protein
            ZK643.8 protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 1035 GXXCXGXXGXCAGEXGGLGXXXGAPRWGXXPXXWXGGXGXXXG 907
            G  C G  G C G  GG G   G    G       GG G   G
Sbjct: 80   GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122



 Score = 29.5 bits (63), Expect = 5.6
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 1035 GXXCXGXXGXCAGEXGGLGXXXGAPRWGXXPXXWXGGXGXXXG 907
            G  C G  G C G  GG G   G    G       GG G   G
Sbjct: 100  GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/52 (30%), Positives = 17/52 (32%)
 Frame = -2

Query: 1035 GXXCXGXXGXCAGEXGGLGXXXGAPRWGXXPXXWXGGXGXXXGXARTXRXGG 880
            G  C G  G C G  GG G   G    G       G  G   G +     GG
Sbjct: 107  GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = -2

Query: 1035 GXXCXGXXGXCAGEXGGLGXXXGAPRWGXXPXXWXGGXGXXXGXARTXRXGG 880
            G  C G  G C G  GG G   G    G       GG     G       GG
Sbjct: 114  GGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGG 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,259,748
Number of Sequences: 27780
Number of extensions: 128174
Number of successful extensions: 334
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3715184046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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