Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D24
         (908 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC4B3.11c |||conserved eukaryotic protein|Schizosaccharomyces ...    28   2.1  
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c...    27   2.8  
SPAC1834.06c |pmo25||mo25 family protein Pmo25|Schizosaccharomyc...    27   4.9  
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar...    26   6.4  

>SPCC4B3.11c |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 116

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 288 FFSDPGQQLIMGIIARDLDHSDAEASITAGGXGFSY-ANIKLKSPRGSGLXYQ 443
           F+S PG++ I  I+   L  S       +GG G  Y   IK K+ +G     Q
Sbjct: 27  FYSTPGERRIKDILTEKLSPSSLRVIDVSGGCGSMYQVAIKSKAFQGKNTLAQ 79


>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1274

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -1

Query: 413 FQLYVGIRKPXASCSNTCFSIRVV 342
           F++ V + KP +S SNTCFS+R V
Sbjct: 689 FEIPVTVMKP-SSISNTCFSLRDV 711


>SPAC1834.06c |pmo25||mo25 family protein Pmo25|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 329

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 424 ALDXTTNLKSTRKKVIL*NHSFQSRSFLSFHV*FRLLYSIFNVXLMSE 567
           + D  ++  ST K ++L NH  Q   F+S+H  F   +  + V L SE
Sbjct: 173 SFDMASDAFSTFKSILL-NHKSQVAEFISYH--FDEFFKQYTVLLKSE 217


>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 424

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 431 SRASWAFQLYVGIRKPXASCSNTCFSIRV 345
           +R SWA+    G  K   +CS TC    V
Sbjct: 223 ARVSWAWSTVCGCYKNTYTCSQTCLEDEV 251


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,312,678
Number of Sequences: 5004
Number of extensions: 38396
Number of successful extensions: 73
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)