Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D22
         (1691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor...    34   1.8  
AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens ...    33   4.1  

>AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor
            candidate region protein 1 protein.
          Length = 1509

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 28/116 (24%), Positives = 37/116 (31%), Gaps = 1/116 (0%)
 Frame = +2

Query: 1073 PPPSRSXPXAXAPTQP-LXXVXXXVATPLTXXXNXLQAPXXSMLIARXXLXXXPPPPXXX 1249
            PP S   P A  P QP L         PL    +   +   S + +        P P   
Sbjct: 794  PPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPS 853

Query: 1250 DLSXGLXTPPHTXPXXXTXPXQSXHLXPRXRXXXPAPXRATALSXDTXVSXXRPRA 1417
            D    L  PP   P     P  + HL P      P P R   +      +  +P+A
Sbjct: 854  DFQ--LQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKA 907


>AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens cDNA:
            FLJ22184 fis, clone HRC00983. ).
          Length = 616

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 24/87 (27%), Positives = 29/87 (33%)
 Frame = +2

Query: 1073 PPPSRSXPXAXAPTQPLXXVXXXVATPLTXXXNXLQAPXXSMLIARXXLXXXPPPPXXXD 1252
            PPP  + P    P+ P        ATP          P    L+A   L   P PP    
Sbjct: 219  PPPLAAPPLQVPPSPPASPPMSPSATP---------PPRVPPLLAAPPLQVPPSPPASLP 269

Query: 1253 LSXGLXTPPHTXPXXXTXPXQSXHLXP 1333
            +S     PP   P   T P Q+    P
Sbjct: 270  MSPLAKPPPQAPPALATPPLQALPSPP 296


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,765,136
Number of Sequences: 237096
Number of extensions: 1726155
Number of successful extensions: 5578
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5109
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 25594285822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)