Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D20
(952 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6) 27 0.075
SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.36
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 30 2.4
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 4.8
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 5.5
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0) 24 6.0
SB_18739| Best HMM Match : YhhN (HMM E-Value=7.3) 29 7.3
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.3
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 29 7.3
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 7.3
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 28 9.6
SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53) 28 9.6
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 9.6
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 28 9.6
SB_11994| Best HMM Match : ERM (HMM E-Value=0.28) 28 9.6
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 9.6
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 28 9.6
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 9.6
>SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6)
Length = 479
Score = 27.5 bits (58), Expect(2) = 0.075
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPP 757
P P ++ PPPPPPP
Sbjct: 411 PTPNRRRRRSLVQPPPPPPP 430
Score = 26.6 bits (56), Expect(2) = 0.075
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 777 PPPPPPPP 754
PPPPPPPP
Sbjct: 434 PPPPPPPP 441
>SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect(2) = 0.36
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPPP 754
P P PPPPPPPP
Sbjct: 365 PAPLSSTPCAPFAPPPPPPPP 385
Score = 23.8 bits (49), Expect(2) = 0.36
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -2
Query: 777 PPPPPPPPXXXXXXXXXXXXKKKK 706
PPPPPP P K+K+
Sbjct: 383 PPPPPPAPGSTPVKSVVDIIKEKR 406
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPPP 754
P P K PPPPPPPP
Sbjct: 346 PTPTTPKTHPQLGPPPPPPPP 366
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 834 KKKXXXPXPXXXKKXXXXXPPPPPPPP 754
+ + P P + PPPPPPPP
Sbjct: 854 RSRYRRPRPRPRRPPPPPPPPPPPPPP 880
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 974 PPPPGGSAPPPPPPPPPPPP 993
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 777 PPPPPPP 757
PPPPPPP
Sbjct: 920 PPPPPPP 926
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 774 PPPPPPP 754
PPPPPPP
Sbjct: 953 PPPPPPP 959
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 23.8 bits (49), Expect(2) = 4.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 777 PPPPPPP 757
PPPPPPP
Sbjct: 384 PPPPPPP 390
Score = 23.8 bits (49), Expect(2) = 4.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 774 PPPPPPP 754
PPPPPPP
Sbjct: 394 PPPPPPP 400
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.1 bits (62), Expect = 5.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP + PPPPPPP
Sbjct: 727 PPPPSPQPGCAGLPPPPPPP 746
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 699 PPPPPLLSGTLPMPPPPPPP 718
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 700 PPPPLLSGTLPMPPPPPPPP 719
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 29.1 bits (62), Expect = 5.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP + PPPPPPP
Sbjct: 65 PPPPPRRGFYDDYPPPPPPP 84
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 5.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 1163 PPPPPPSSPSPPPPPPPPPP 1182
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 1162 PPPPPPPSSPSPPPPPPPPP 1181
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 1165 PPPPSSPSPPPPPPPPPPPP 1184
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 1160 PPPPPPPPPSSPSPPPPPPP 1179
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 1161 PPPPPPPPSSPSPPPPPPPP 1180
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPPP 754
P P PPPPPPPP
Sbjct: 1164 PPPPPSSPSPPPPPPPPPPPP 1184
>SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0)
Length = 1038
Score = 23.8 bits (49), Expect(2) = 6.0
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -2
Query: 777 PPPPPPPPXXXXXXXXXXXXKKKK 706
P PPPPPP KK++
Sbjct: 756 PAPPPPPPEATALCKRTYSAKKRE 779
Score = 23.4 bits (48), Expect(2) = 6.0
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPP 760
P P + PPPPPP
Sbjct: 745 PYPITGRTPSLPAPPPPPP 763
>SB_18739| Best HMM Match : YhhN (HMM E-Value=7.3)
Length = 306
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 798 KKXXXXXPPPPPPPP 754
KK PPPPPPPP
Sbjct: 246 KKRSNRPPPPPPPPP 260
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 572 PPPXGXGGXGGPPP 613
PPP G G GGPPP
Sbjct: 503 PPPPGAGQGGGPPP 516
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 572 PPPXGXGGXGGPPP 613
PPP G G GGPPP
Sbjct: 536 PPPPGAGQGGGPPP 549
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 572 PPPXGXGGXGGPPP 613
PPP G G GGPPP
Sbjct: 589 PPPPGAGQGGGPPP 602
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 382 PPPPPPSPPPPPQPPPPPPP 401
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPPP 754
P P + PPPPPPPP
Sbjct: 387 PSPPPPPQPPPPPPPPPPPPP 407
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPP 384
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPP 385
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPP 386
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 368 PPPPPPPPPSPPPPPPPPPP 387
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 384 PPPPSPPPPPQPPPPPPPPP 403
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 385 PPPSPPPPPQPPPPPPPPPP 404
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 389 PPPPPQPPPPPPPPPPPPPP 408
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 390 PPPPQPPPPPPPPPPPPPPP 409
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 391 PPPQPPPPPPPPPPPPPPPP 410
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 395 PPPPPPPPPPPPPPPPPPPP 414
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 396 PPPPPPPPPPPPPPPPPPPP 415
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 397 PPPPPPPPPPPPPPPPPPPP 416
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 398 PPPPPPPPPPPPPPPPPPPP 417
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 399 PPPPPPPPPPPPPPPPPPPP 418
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 407 PPPPPPPPPPPPAPPPPPPP 426
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 408 PPPPPPPPPPPAPPPPPPPP 427
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 409 PPPPPPPPPPAPPPPPPPPP 428
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 410 PPPPPPPPPAPPPPPPPPPP 429
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 411 PPPPPPPPAPPPPPPPPPPP 430
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 412 PPPPPPPAPPPPPPPPPPPP 431
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 413 PPPPPPAPPPPPPPPPPPPP 432
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 216 PPPPPPPSPSPPRPPPPPPP 235
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 464 PPPPPPPPPPPPPPPPPPPP 483
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 465 PPPPPPPPPPPPPPPPPPPP 484
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 466 PPPPPPPPPPPPPPPPPPPP 485
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 467 PPPPPPPPPPPPPPPPPPPP 486
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 468 PPPPPPPPPPPPPPPPPPPP 487
>SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53)
Length = 264
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 73 PPPLCAPPPPPPPPPPPPPP 92
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 374 PPPGRRPPSGKINPPPPPPP 393
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 569 PPPPXGXGGXGGPPP 613
PPPP G GG PPP
Sbjct: 196 PPPPPGPGGIPPPPP 210
>SB_11994| Best HMM Match : ERM (HMM E-Value=0.28)
Length = 465
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 274 PPPLCAPPPPPPPPPPPPPP 293
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 286 PPPGRRPPSGKINPPPPPPP 305
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 303 PPPPPLPAGVPAPPPPPPPP 322
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 318 PPPPPPPPGDGGAPPPPPPP 337
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 569 PPPPXGXGGXGGPPP 613
PPPP G GG PPP
Sbjct: 321 PPPPPGDGGAPPPPP 335
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 189 PPPSGGPPPPPPPPPPPPPP 208
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,341,626
Number of Sequences: 59808
Number of extensions: 292006
Number of successful extensions: 4686
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2137
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2788625034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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