Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D20
(952 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.8
U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical pr... 25 2.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.7
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 25 3.8
AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spe... 24 4.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 4.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 4.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 24 5.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 24 5.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 24 6.0
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 29 6.5
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 29 6.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.5
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 28 8.5
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP + PPPPPPP
Sbjct: 125 PPPPRKSRAGGSSPPPPPPP 144
>U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical
protein T13A10.1 protein.
Length = 155
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -2
Query: 777 PPPPPPPPXXXXXXXXXXXXKKKK 706
P PPPPPP KK+K
Sbjct: 51 PAPPPPPPEAEKKPEKEEEPKKEK 74
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -2
Query: 834 KKKXXXPXPXXXKKXXXXXPPPPPPPP 754
K K P P PP PPPP
Sbjct: 30 KPKATAPKPISSISSNSKVAPPAPPPP 56
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 26.6 bits (56), Expect(2) = 3.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 777 PPPPPPPP 754
PPPPPPPP
Sbjct: 577 PPPPPPPP 584
Score = 21.4 bits (43), Expect(2) = 3.1
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPP 757
P P PPPPPP
Sbjct: 524 PMPGMAPLSTGAPTPPPPPP 543
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPPP 754
P P ++ PPPPPPPP
Sbjct: 754 PQPIQQQQSSIPPPPPPPPPP 774
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPPP 754
P P ++ PPPPPPPP
Sbjct: 754 PQPIQQQQSSIPPPPPPPPPP 774
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPP 814
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP + PPPPPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPP 583
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP + PPPPPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPP 582
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 576 PPPPPPPPPMLGGPPPPPPP 595
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 577 PPPPPPPPMLGGPPPPPPPP 596
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 24.6 bits (51), Expect(2) = 3.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 798 KKXXXXXPPPPPPP 757
K+ PPPPPPP
Sbjct: 15 KRHVVSTPPPPPPP 28
Score = 23.4 bits (48), Expect(2) = 3.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 777 PPPPPPPP 754
PPPPPP P
Sbjct: 23 PPPPPPAP 30
>AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective
spermatogenesis protein 8 protein.
Length = 512
Score = 24.2 bits (50), Expect(2) = 4.3
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPP 757
P P PPPPPPP
Sbjct: 57 PTPLTPAITPCEAPPPPPPP 76
Score = 23.4 bits (48), Expect(2) = 4.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 777 PPPPPPPP 754
PPPPPP P
Sbjct: 71 PPPPPPKP 78
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 26.6 bits (56), Expect(2) = 4.4
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPP 761
PPP + PPPPPP
Sbjct: 345 PPPPPGMRYPGGMPPPPPP 363
Score = 21.0 bits (42), Expect(2) = 4.4
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 775 PPPPPP 758
PPPPPP
Sbjct: 392 PPPPPP 397
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 26.6 bits (56), Expect(2) = 4.4
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPP 761
PPP + PPPPPP
Sbjct: 335 PPPPPGMRYPGGMPPPPPP 353
Score = 21.0 bits (42), Expect(2) = 4.4
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 775 PPPPPP 758
PPPPPP
Sbjct: 382 PPPPPP 387
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 24.2 bits (50), Expect(2) = 5.5
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPP 757
P P PPPPPPP
Sbjct: 662 PVPPPGGLGGFMPPPPPPPP 681
Score = 23.0 bits (47), Expect(2) = 5.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 777 PPPPPPPP 754
PPPPPP P
Sbjct: 676 PPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 24.2 bits (50), Expect(2) = 5.5
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPP 757
P P PPPPPPP
Sbjct: 662 PVPPPGGLGGFMPPPPPPPP 681
Score = 23.0 bits (47), Expect(2) = 5.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 777 PPPPPPPP 754
PPPPPP P
Sbjct: 676 PPPPPPMP 683
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 24.2 bits (50), Expect(2) = 6.0
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPP 757
P P PPPPPPP
Sbjct: 59 PCPAQFCPPPPICPPPPPPP 78
Score = 23.0 bits (47), Expect(2) = 6.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 777 PPPPPPPP 754
PPPPPP P
Sbjct: 82 PPPPPPMP 89
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPPP 754
P P + PPPPPPPP
Sbjct: 234 PRPTTRRLPPPTTPPPPPPPP 254
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPPP 754
P P + PPPPPPPP
Sbjct: 232 PRPTTRRLPPPTTPPPPPPPP 252
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPP 1362
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/18 (66%), Positives = 12/18 (66%), Gaps = 3/18 (16%)
Frame = +2
Query: 569 PPPPX---GXGGXGGPPP 613
PPPP G GG GGPPP
Sbjct: 782 PPPPSFRGGRGGHGGPPP 799
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 832 KKXXXPPPXXXKKXXXXXPPPPPPP 758
K PPP PPPPPPP
Sbjct: 487 KSPPPPPPLPPIATPSSVPPPPPPP 511
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 636 PPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 462 PPPMGLPAVGAGAPPPPPPP 481
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPP 765
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPP 765
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP 777
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 832 KKXXXPPPXXXKKXXXXXPPPPPPP 758
K PPP PPPPPPP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPP 518
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 234 PPPPPLPPVGAGAPPPPPPP 253
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPP 348
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPP 360
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 817 PPPXXXKKXXXXXPPPPPPP 758
PPP PPPPPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPP 239
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 816 PXPXXXKKXXXXXPPPPPPPP 754
P P PPPPPPPP
Sbjct: 72 PQPYAQSPIAAVPPPPPPPPP 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,530,736
Number of Sequences: 27780
Number of extensions: 309481
Number of successful extensions: 6136
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2799
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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