Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D19
         (856 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    27   0.19 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.8  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   5.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   7.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   7.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   7.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.4  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 21/76 (27%), Positives = 39/76 (51%)
 Frame = +1

Query: 268 PALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEKTKKFCADVISVLAMG 447
           PALQ  ++LI     ++      L  L E +  +K  Y K+TD K K+F   +  +L++G
Sbjct: 50  PALQYCTHLIY-GYAAIDEETYKLTPLNEQFDVIKDNYRKVTDLK-KRF-PKLKVLLSVG 106

Query: 448 VSGTLEVAEKRECLKY 495
            +  +   ++ + +KY
Sbjct: 107 GNADVSGQDEEKNIKY 122


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 533 PQSPTFDNVPRRQYFKHSLFSATSRVPLTPI 441
           P  P   N+    Y  HS++ +++ +PL  I
Sbjct: 334 PNLPLTHNIAHNPYPSHSIYPSSNLMPLNNI 364


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = +1

Query: 88  KRKR*VNKMT--VKNKTDEPKKEKAEPAVAPNDDLS--EEDKR 204
           +R +  NKMT   KNKTD+      +  V+ +DD    EEDKR
Sbjct: 140 RRLKKENKMTWEPKNKTDDDD----DALVSDSDDREKDEEDKR 178


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 20/73 (27%), Positives = 32/73 (43%)
 Frame = -3

Query: 647 ECFMSNVITSRTSGNSESMFSIFHSSAISPSNCLTYSCPQSPTFDNVPRRQYFKHSLFSA 468
           E  +S V+ S+ +GNS    S   S  +S     TY     PT   VP  +   +S    
Sbjct: 6   EPLLSGVV-SQINGNSGDSTSSATSIDLSTFRVPTYGTTSHPTSKLVPPDERITYSWTEI 64

Query: 467 TSRVPLTPIAKTE 429
            +   ++P +KT+
Sbjct: 65  NAFANVSP-SKTK 76


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 394 DEKT--KKFCADVISVLAMGVSGTLEVAEKRECLK 492
           D KT  KK+  D+IS  A G++      +  E LK
Sbjct: 165 DVKTAMKKYSVDIISTCAFGINTYCFRNDNSEILK 199


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 604 LPLVRDVITFDMKHSAXIQACXLLMEIDRLDLLTQHM 714
           + L  DV+ F +K       C  L E  R + +T+H+
Sbjct: 221 IALNNDVLLFFVKVFRPEPLCERLFEASREEYVTRHL 257


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -3

Query: 647 ECFMSNVITSRTSGNSESMFSIFHSSAISPSNCLTYSCPQSPTFDNVPRRQYFKHS 480
           E  +S V+ S+ +GNS    S   S  +S     TY     PT   VP  +   +S
Sbjct: 6   EPLLSGVV-SQINGNSGDSTSSATSIDLSTFRVPTYGTTSHPTSKLVPPDERITYS 60


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 346 LREHYPALKQVYEKI 390
           L EH   L+QV+EK+
Sbjct: 468 LNEHLEHLRQVFEKL 482


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 7   PPPAPSREPLSS*SIHTVGKVILFY 81
           PPP P R    + ++ TV K+   Y
Sbjct: 732 PPPPPPRVESFAETVRTVSKIPPLY 756


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,003
Number of Sequences: 336
Number of extensions: 3834
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)