Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D19
(856 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|... 145 8e-36
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 30 0.48
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 29 0.84
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.84
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 29 1.1
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 28 1.5
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 1.9
SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces... 27 2.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 4.5
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 27 4.5
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 26 5.9
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 26 5.9
SPBC1703.03c |||armadillo repeat protein, unknown biological rol... 26 5.9
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 26 7.8
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 7.8
>SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit
Mts4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 145 bits (351), Expect = 8e-36
Identities = 81/207 (39%), Positives = 114/207 (55%), Gaps = 5/207 (2%)
Frame = +1
Query: 178 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 357
+DLSEED +L+ +L +LV + +L +L L +IRTST+SMT+VPKPLKFLR H
Sbjct: 44 EDLSEEDLQLKNDLELLVQAVQDATPELVGSSLTQLKEIIRTSTSSMTAVPKPLKFLRPH 103
Query: 358 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 537
Y L ++Y+ K AD++SVL M S T K E LKY L G ++ WGH
Sbjct: 104 YFTLVKIYDSWPQSPQKTQLADILSVLGMSYSNT----SKHESLKYRLQGVTTDPSLWGH 159
Query: 538 EYVRQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHSAXIQACXLLMEIDRLDLL 702
EYVR L EI EE+ D L+ L ++ F + H+A A LL E+ ++ +
Sbjct: 160 EYVRHLASEIEEEFASRQEEEAPTDDLMELALTIVPFFLTHNAEADAIDLLQELGAIEKV 219
Query: 703 TQHMDQSNYPRVCLYLIGCASXVVEPE 783
++ N RVCLY+ C + + PE
Sbjct: 220 VPFVELDNASRVCLYITSCVNLLPFPE 246
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 29.9 bits (64), Expect = 0.48
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 157 EPAVAPNDDLSEEDKRLQEELNMLVDK 237
+P +A +DL E+KRLQ +LN + +K
Sbjct: 3 DPFIAEENDLDLEEKRLQRQLNEIQEK 29
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 29.1 bits (62), Expect = 0.84
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Frame = +1
Query: 268 PALQMLSNLIRTSTTSMTSVPKPLK---FLREHYPALKQVYEKITDEKTKKFCADVISVL 438
P++ L I + +M + LK ++ E PAL ++ I +EK K F + I +
Sbjct: 1805 PSMSALCRFIIYKSVTMLQNGEVLKSGDYVTEFIPALLDMHVHIPEEKKKSFLSMSIPI- 1863
Query: 439 AMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQL---EGEIAEEWNIENMD 597
A S +E A+ R+ + LL ++ D ++QL + + EE I+N++
Sbjct: 1864 AAHFSILVEHADARKRIGEKLLKIMAIQPDEAKAIIQQLSPRQKKCVEEILIQNVE 1919
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.1 bits (62), Expect = 0.84
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 190 EEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFL 348
EE + LQEE+N++ K L + V+ Y L M+ +L + +S++ + +L
Sbjct: 1609 EETEWLQEEVNIMKIKELTSTVNKYREQLAMVQSLNEHAESSLSKAERSKNYL 1661
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 28.7 bits (61), Expect = 1.1
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Frame = -3
Query: 647 ECFMSNVITSRTSGNSESMFSIFHSSAIS-PSNCLTYSCPQSPTFDNVPRRQYFKHSLFS 471
E ++ N I S N+ S+ I + +S S +T CP+ P F V ++F H+ +
Sbjct: 1068 EIYLRNHILSDEMANNLSILPIRIQAWVSYDSEKVTTVCPREP-FKLV--LEFFGHADTN 1124
Query: 470 ATSRVPLTPIAKTEITSAQNFFVFSSVIFSYTCFNAG*CSLRNFRGLGTEVIDVVDVLMR 291
++ T + TS+ N + CFN C + R + + ++ +R
Sbjct: 1125 MRYKISWTQLNTQANTSSFNGLILDGPEEDIVCFNNSKCHVVIERNMFAYTTGMYNIFVR 1184
Query: 290 LLS 282
+ +
Sbjct: 1185 IFN 1187
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 127 KTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDK 237
+ +P+KE P D + E+ ++E +NML+ K
Sbjct: 592 RVSKPEKEHTNPNAEQGDVIPEKPMSIKERMNMLMTK 628
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +1
Query: 259 LYFPALQM-LSNLIRTSTTSMTSVPKPLKFLREHY-PALKQVYEKITDEKTKKFCADVIS 432
++FPA + ++ +I TS + + FL H P L+ +YE + +EK++ F + S
Sbjct: 204 VFFPAAKATITQMIETSIRFLRT------FLDMHIKPQLQHIYESVVEEKSEAFASATSS 257
Query: 433 VLAMGVSGTL 462
+ +S ++
Sbjct: 258 KILSEMSASM 267
>SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 356
Score = 27.5 bits (58), Expect = 2.6
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Frame = +1
Query: 160 PAVAPNDDLSEEDKR-LQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKP 336
P P ++LSEED + +EL +L D E D + ++ L+ T +T+ +
Sbjct: 242 PLAGP-EELSEEDMDGMFDELQLLPDDKK-REPDHF-----IMKTLVETLVL-LTATREG 293
Query: 337 LKFLREH--YPALKQVYEKITDEKTKKFCADVISVL 438
+ +R YP +++++ + DE+ ++ C ++ +L
Sbjct: 294 REHMRRRKVYPIIRELHLNVDDEEIREVCDQLVQML 329
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 4.5
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = +1
Query: 91 RKR*VNKMTVKNKTDEPKKEKAEPAV-APNDDLSEEDKRLQEELNMLVDKLLGNEVDLYF 267
+KR K V N ++ KK A PA ND L K +Q+E+N L EV
Sbjct: 1002 KKRIHEKSLVVNALED-KKLAATPANDVQNDSLIYRIKSVQDEINRLSTSNKSPEVASMN 1060
Query: 268 PALQMLSNLIRTSTTSMTSVPKPLKFLR-EHYPA--LKQVYEKITDEKTKKFCADVISVL 438
L+ LS + + + V + L + + A K Y++ + E T++ + S L
Sbjct: 1061 VRLEELSTRVSKMLSDINEVDHTIASLSLKLFQAEDTKNSYDQTSPEATQERNRTISSKL 1120
Query: 439 A 441
A
Sbjct: 1121 A 1121
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 109 KMTVKNKTDEPKKEKAEPAVAPNDDLSEEDKRLQEEL 219
K+ +KN +E E V ++ +EEDK L+E +
Sbjct: 528 KLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERI 564
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 26.2 bits (55), Expect = 5.9
Identities = 25/111 (22%), Positives = 42/111 (37%)
Frame = +1
Query: 106 NKMTVKNKTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQML 285
N +TV E E + +DDL + D + + + K + E+DL +L
Sbjct: 449 NAVTVFLPNPESVDNSDESSETSDDDLDDSDDDNKVKEGKVSSKFIAVELDL---SLGAF 505
Query: 286 SNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEKTKKFCADVISVL 438
+N + ++ K K ALK KI + + AD +L
Sbjct: 506 ANARKQYELRREALIKETKTAEAASKALKSTQRKIEQDLKRSTTADTQRIL 556
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 560 PSNCLTYSCPQSPTFDNVPRRQYFKHSLFSATSRVPLTP 444
P+N + +SPT VP +Y +S+ A PL P
Sbjct: 450 PNNYEVSTIMRSPTISTVPPPKYLSNSINGAKFLNPLAP 488
>SPBC1703.03c |||armadillo repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 664
Score = 26.2 bits (55), Expect = 5.9
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 352 EHYPAL-KQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGD 528
E+Y L +QVY+K T KTKK + S L + + TLE+ L L ++ D
Sbjct: 304 ENYRNLVRQVYDKDTYFKTKKDDLTLSSELLV-IPATLELISSMTSL-------LQSLAD 355
Query: 529 WGHEYVRQLEGEIAEEWNIENMDSLLPLVRD 621
G + + + E + E+ ++ MD + +V +
Sbjct: 356 -GTDELEEQEDSLMEDEDLSYMDDMSNVVNE 385
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 541 IHVPNHLHLTMFLEDNTSNT 482
+++P H+HL LE+ SNT
Sbjct: 1042 MNIPGHIHLLRELEEEKSNT 1061
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 157 EPAVAPNDDLSEEDKRLQEELNMLVDKLLGNEVDL 261
E AVA N++LSE LQ N +KL + + L
Sbjct: 563 EAAVATNNELSESKNSLQTLCNAFQEKLAKSVMQL 597
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,240,875
Number of Sequences: 5004
Number of extensions: 64277
Number of successful extensions: 244
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -