Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D19
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 208 5e-54
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 34 0.15
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 34 0.15
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 34 0.15
U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical pr... 32 0.45
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 29 3.2
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 28 9.7
U29381-9|AAA68749.2| 503|Caenorhabditis elegans Prion-like-(q/n... 28 9.7
U29381-4|AAM98023.1| 511|Caenorhabditis elegans Prion-like-(q/n... 28 9.7
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 28 9.7
AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical ... 28 9.7
AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical ... 28 9.7
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 208 bits (507), Expect = 5e-54
Identities = 103/228 (45%), Positives = 150/228 (65%), Gaps = 6/228 (2%)
Frame = +1
Query: 121 KNKTDEPK-KEKAEPAVAPNDDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLI 297
K K D+ K EKAEP +++SEED++L+E+LN+LV +L + LY P+L+ + LI
Sbjct: 14 KKKADDKKVPEKAEPK---KEEMSEEDQKLEEDLNLLVQRLSEPDTTLYKPSLETMRTLI 70
Query: 298 RTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEK 477
R STTSMTSVPKPLKF+R HY +K+++ I KK CAD+ISVLAM E+
Sbjct: 71 RASTTSMTSVPKPLKFMRPHYNKMKEIFTSIVAPDVKKLCADIISVLAMTSD------ER 124
Query: 478 RECLKYCLLGTLSNVGDWGHEYVRQLEGEIAEEWNIENMD-----SLLPLVRDVITFDMK 642
+ + Y +LG+ +GDWGHEYVR L E++EEW E LL L +D+++ MK
Sbjct: 125 TDTINYRILGSHEPIGDWGHEYVRHLAMEMSEEWKKEGTSDARKAELLKLTQDIVSHHMK 184
Query: 643 HSAXIQACXLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASXVVEPES 786
H+A ++AC LL+EI+R+DLL ++ + ++ RVCLYL+ CA +P++
Sbjct: 185 HNAEVEACDLLIEIERIDLLISYVQEVDHQRVCLYLLSCAPLTPDPDN 232
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 124 NKTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKL--LGNEVDLYFPALQMLSNLI 297
N E K + + ++L E+ RL+ E+N L DK L NE + ++ I
Sbjct: 654 NSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQI 713
Query: 298 RTSTTSMTSVPKPLKFLREHYPALKQVYEKITDE 399
R S ++ K L LRE Y + EKI E
Sbjct: 714 RYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGE 747
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 124 NKTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKL--LGNEVDLYFPALQMLSNLI 297
N E K + + ++L E+ RL+ E+N L DK L NE + ++ I
Sbjct: 727 NSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQI 786
Query: 298 RTSTTSMTSVPKPLKFLREHYPALKQVYEKITDE 399
R S ++ K L LRE Y + EKI E
Sbjct: 787 RYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGE 820
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 124 NKTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKL--LGNEVDLYFPALQMLSNLI 297
N E K + + ++L E+ RL+ E+N L DK L NE + ++ I
Sbjct: 727 NSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQI 786
Query: 298 RTSTTSMTSVPKPLKFLREHYPALKQVYEKITDE 399
R S ++ K L LRE Y + EKI E
Sbjct: 787 RYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGE 820
>U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical
protein B0495.8a protein.
Length = 313
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 355 HYPALKQVYEKITDEKTKKFCADVISVLAMGVS-GTLEVAEKRECLKYCLLGTLSNVGDW 531
H PA K YE+ EK + D ++ V +E+A+ RE L+ + S D
Sbjct: 62 HEPAHKADYERAQKEKDHFYDVDAFEIIEHAVHLVDIEIAKVREKLEDDVKTQTSQAADS 121
Query: 532 GHEYVRQLEGEIAEEWNIENMDSL 603
+ V ++E +IA+ N+++++ L
Sbjct: 122 KAKQVAEIEEKIAK--NVDDIEKL 143
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = +1
Query: 103 VNKMTVKNKTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQM 282
V K V T + K K E V ++ E+ K + EL ++D GN
Sbjct: 273 VKKPEVATGTVQKLKTKTEINVEKEKEVEEKKKDSESELVQVIDGSTGNSTGSTVETTPS 332
Query: 283 LSNLIRTSTTSMTS 324
S +STTS T+
Sbjct: 333 TSTTTTSSTTSTTT 346
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 29.5 bits (63), Expect = 3.2
Identities = 29/116 (25%), Positives = 52/116 (44%)
Frame = +1
Query: 118 VKNKTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLI 297
+K+ +E KK+ + DD+++E ++ + L DK +G+++D A++ SNL
Sbjct: 324 IKSNVNEVKKDVEKNIAEKVDDITKELEKSAKSLEETTDK-IGSKIDNTSQAIK--SNLE 380
Query: 298 RTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLE 465
S + SV +K + L +K D +K A S + TLE
Sbjct: 381 EASLKTEKSVNDAVKSGEKLIGDLASEAKKTFDSAEQKLDAK-FSKIGSTADSTLE 435
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 106 NKMTVKNKTDEPKKEKAEPAVAPNDDLSEE-DKRLQEELNMLVD 234
NK TV NK PKK++ +DD+ E+ D+ Q E L D
Sbjct: 111 NKATVANKKGRPKKQQTWITKDIDDDIYEKPDESAQGEAKRLAD 154
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +1
Query: 118 VKNKTDEPKKEKAEPAVAPNDDLSEEDK----RLQEELNMLVDKLL 243
VKN+T + KK++ + D+ +E + ++QE N L++KL+
Sbjct: 298 VKNETSDMKKQQETQILKEQDEFQDEIRQEFLKIQENENKLIEKLM 343
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 121 KNKTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKLLGNEVDLYF 267
+ K DE +K K E D+L + + Q E +ML+++ LG+E D+ +
Sbjct: 1057 QEKLDELQKLKEE-----FDELKKAETMWQAEKDMLIERCLGSESDIEY 1100
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 121 KNKTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKLLGNEVDLYF 267
+ K DE +K K E D+L + + Q E +ML+++ LG+E D+ +
Sbjct: 1059 QEKLDELQKLKEE-----FDELKKAETMWQAEKDMLIERCLGSESDIEY 1102
>U29381-9|AAA68749.2| 503|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 35,
isoform a protein.
Length = 503
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 127 KTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKLL----GNEVDLYFPALQMLSNL 294
++D+P K K + P DD + EE N + L+ NE + F LQ L +
Sbjct: 133 RSDDPIKPKIIDVIQPQDDDNTVKVSSSEESNDVAKPLMFNQYSNEQNEKFGFLQALMDK 192
Query: 295 IRTSTTSM 318
IR SM
Sbjct: 193 IRKHAESM 200
>U29381-4|AAM98023.1| 511|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 35,
isoform b protein.
Length = 511
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 127 KTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKLL----GNEVDLYFPALQMLSNL 294
++D+P K K + P DD + EE N + L+ NE + F LQ L +
Sbjct: 141 RSDDPIKPKIIDVIQPQDDDNTVKVSSSEESNDVAKPLMFNQYSNEQNEKFGFLQALMDK 200
Query: 295 IRTSTTSM 318
IR SM
Sbjct: 201 IRKHAESM 208
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 121 KNKTDEPKKEKAEPAVAPNDDLSEEDKRLQEELNMLVDKLLGNEVDLYF 267
+ K DE +K K E D+L + + Q E +ML+++ LG+E D+ +
Sbjct: 1059 QEKLDELQKLKEE-----FDELKKAETMWQAEKDMLIERCLGSESDIEY 1102
>AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical
protein Y76B12C.7 protein.
Length = 1454
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 46 SIHTVGKVILFYLIKRKR*VNKMTVKNKTDEPKKE---KAEPAVAPNDDLSEEDKRLQEE 216
SIH++ ++ + Y I R V ++ V +E +KE KA+ A ++E ++L E
Sbjct: 786 SIHSLPEMEVVYQIGRFSNVPELLVDLTVEEEEKERKAKAQQAAKEASVPTDEAEQLNTE 845
Query: 217 LNMLVDKLLGNEV 255
+ L +++L ++
Sbjct: 846 MKQLCERVLEAQI 858
>AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical
protein Y40C7B.5 protein.
Length = 610
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 181 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSM----TSVPKPLKFL 348
D SEED L L LVDKL + L +L+ + N + S S+ + L+F
Sbjct: 493 DHSEEDNILLSSLKCLVDKL--ETISLQNISLEDVVNRLSESYKSLLARIVELESELEFE 550
Query: 349 REHYPALKQVYEKITDEKTKKF 414
+E AL++ K + +K +
Sbjct: 551 KEKNRALQETINKSSSADSKLY 572
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,905,638
Number of Sequences: 27780
Number of extensions: 358732
Number of successful extensions: 1412
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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