Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D18
         (949 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    25   0.86 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    25   0.86 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    25   0.86 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   8.0  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 557 SSLPWWENNRVYFKIHNTKYNQYLKMSTTTCNCNS 661
           S+ PWWE  +    I NT+      ++     CN+
Sbjct: 70  SNRPWWERYQPVSYILNTRSGDEAALADMISRCNA 104


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 557 SSLPWWENNRVYFKIHNTKYNQYLKMSTTTCNCNS 661
           S+ PWWE  +    I NT+      ++     CN+
Sbjct: 71  SNRPWWERYQPVSYILNTRSGDETALADMISRCNA 105


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 557 SSLPWWENNRVYFKIHNTKYNQYLKMSTTTCNCNS 661
           S+ PWWE  +    I NT+      ++     CN+
Sbjct: 71  SNRPWWERYQPVSYILNTRSGDEAALADMISRCNA 105


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 143 PPARASLHSPRTLLTKPSRXNCTT 214
           PP ++ + +P+  +T PS  N +T
Sbjct: 410 PPMQSQIINPQPQITSPSNTNTST 433


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 399 GKYFLTISCPLPTHSL*QYSMVFRLL 322
           G  F T+   +P H+  +Y  VF++L
Sbjct: 263 GSVFNTVLELMPKHACSEYCRVFKML 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,146
Number of Sequences: 336
Number of extensions: 3349
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26685714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)