Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D18
(949 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033727-1|AAH33727.1| 364|Homo sapiens UNC5A protein protein. 35 0.38
AK131380-1|BAD18531.1| 301|Homo sapiens protein ( Homo sapiens ... 35 0.38
BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated prot... 28 6.7
BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated prot... 28 6.7
BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated prot... 28 6.7
BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated prot... 28 6.7
AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated prot... 28 6.7
AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated prot... 28 6.7
BC121094-1|AAI21095.1| 154|Homo sapiens keratin associated prot... 28 6.7
AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated prot... 28 6.7
AJ406948-1|CAC27587.1| 154|Homo sapiens keratin associated prot... 28 6.7
X07994-1|CAA30801.1| 1927|Homo sapiens protein ( Human mRNA for ... 31 8.1
M61850-1|AAA59504.1| 1927|Homo sapiens lactase phlorizinhydrolas... 31 8.1
AC011893-3|AAX88924.1| 1927|Homo sapiens unknown protein. 31 8.1
>BC033727-1|AAH33727.1| 364|Homo sapiens UNC5A protein protein.
Length = 364
Score = 35.1 bits (77), Expect = 0.38
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 310 VVNYISG*WSPCLGAQIPSADGQHWRRRR*GCCCTVAPRGLGEKC 176
V+ Y+ G WSP D HWR R C APR GE+C
Sbjct: 197 VIVYVDGSWSPWSKWSACGLDCTHWRSRE---CSDPAPRNGGEEC 238
>AK131380-1|BAD18531.1| 301|Homo sapiens protein ( Homo sapiens
cDNA FLJ16449 fis, clone BRAWH2006395, highly similar
to Rattus norvegicus transmembrane receptor Unc5H1. ).
Length = 301
Score = 35.1 bits (77), Expect = 0.38
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 310 VVNYISG*WSPCLGAQIPSADGQHWRRRR*GCCCTVAPRGLGEKC 176
V+ Y+ G WSP D HWR R C APR GE+C
Sbjct: 237 VIVYVDGSWSPWSKWSACGLDCTHWRSRE---CSDPAPRNGGEEC 278
>BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 6.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 359 TACSSTPWCSXSCQ*SGC 306
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 368 CRPTACSSTPW 336
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 6.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 359 TACSSTPWCSXSCQ*SGC 306
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 368 CRPTACSSTPW 336
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 6.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 359 TACSSTPWCSXSCQ*SGC 306
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 368 CRPTACSSTPW 336
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 6.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 359 TACSSTPWCSXSCQ*SGC 306
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 368 CRPTACSSTPW 336
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated protein
9.8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 6.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 359 TACSSTPWCSXSCQ*SGC 306
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 368 CRPTACSSTPW 336
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated protein
9.3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 6.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 359 TACSSTPWCSXSCQ*SGC 306
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 368 CRPTACSSTPW 336
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC121094-1|AAI21095.1| 154|Homo sapiens keratin associated protein
9-4 protein.
Length = 154
Score = 27.9 bits (59), Expect(2) = 6.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 359 TACSSTPWCSXSCQ*SGC 306
T CSSTP C SC S C
Sbjct: 30 TTCSSTPCCQPSCCVSSC 47
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -3
Query: 377 PVRCRPTACSSTPW 336
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated protein
9.9 protein.
Length = 154
Score = 27.9 bits (59), Expect(2) = 6.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 359 TACSSTPWCSXSCQ*SGC 306
T CSSTP C SC S C
Sbjct: 30 TTCSSTPCCQPSCCVSSC 47
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -3
Query: 377 PVRCRPTACSSTPW 336
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>AJ406948-1|CAC27587.1| 154|Homo sapiens keratin associated protein
9.4 protein.
Length = 154
Score = 27.9 bits (59), Expect(2) = 6.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 359 TACSSTPWCSXSCQ*SGC 306
T CSSTP C SC S C
Sbjct: 30 TTCSSTPCCQPSCCVSSC 47
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -3
Query: 377 PVRCRPTACSSTPW 336
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>X07994-1|CAA30801.1| 1927|Homo sapiens protein ( Human mRNA for
lactase-phlorizin hydrolase LPH (EC 3.2.1.23-62). ).
Length = 1927
Score = 30.7 bits (66), Expect = 8.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 400 WEVLSNNFLSVADPQLVAVLHGVPXLVNDQVVNYISG 290
WE NF+S A P +LH + L+ DQ N+++G
Sbjct: 22 WES-DRNFISTAGPLTNDLLHNLSGLLGDQSSNFVAG 57
>M61850-1|AAA59504.1| 1927|Homo sapiens lactase phlorizinhydrolase
protein.
Length = 1927
Score = 30.7 bits (66), Expect = 8.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 400 WEVLSNNFLSVADPQLVAVLHGVPXLVNDQVVNYISG 290
WE NF+S A P +LH + L+ DQ N+++G
Sbjct: 22 WES-DRNFISTAGPLTNDLLHNLSGLLGDQSSNFVAG 57
>AC011893-3|AAX88924.1| 1927|Homo sapiens unknown protein.
Length = 1927
Score = 30.7 bits (66), Expect = 8.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 400 WEVLSNNFLSVADPQLVAVLHGVPXLVNDQVVNYISG 290
WE NF+S A P +LH + L+ DQ N+++G
Sbjct: 22 WES-DRNFISTAGPLTNDLLHNLSGLLGDQSSNFVAG 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,983,920
Number of Sequences: 237096
Number of extensions: 2180939
Number of successful extensions: 4709
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4709
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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