Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D17
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 31 0.86
AC093703-2|AAL77187.3| 473|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024810-19|AAF60770.1| 427|Caenorhabditis elegans Hypothetical... 30 2.6
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 29 3.5
AC006675-8|AAK84554.1| 414|Caenorhabditis elegans Hypothetical ... 29 3.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 4.6
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 6.0
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 6.0
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 6.0
U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astaci... 29 6.0
U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helical... 28 8.0
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 8.0
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical
protein F22G12.5 protein.
Length = 2396
Score = 31.5 bits (68), Expect = 0.86
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Frame = -1
Query: 389 LPLPPTR-NEGPMSQYCKASMWL-----VWIFRTSSSQPASVLQKGVTVCWTMTRLTGRA 228
L LPPT N + C+ L ++ SSS P +V + TV ++TRL G
Sbjct: 620 LQLPPTTVNHRDLWIVCRVDRILSADTAAELYMKSSSDPKAVAKLQKTVSMSLTRLAGHR 679
Query: 227 RYDTCTGIKPSHCFLLTTSQSAAISVRSE-LRASASTTAEWRRAMSRSGA 81
+ T KP L + S S S L +S ST + W S+SGA
Sbjct: 680 QRFAWTA-KPLFPELRSNHSSTISSTTSPMLSSSTSTLSGW----SKSGA 724
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical
protein F22G12.5 protein.
Length = 2396
Score = 31.5 bits (68), Expect = 0.86
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Frame = -1
Query: 389 LPLPPTR-NEGPMSQYCKASMWL-----VWIFRTSSSQPASVLQKGVTVCWTMTRLTGRA 228
L LPPT N + C+ L ++ SSS P +V + TV ++TRL G
Sbjct: 620 LQLPPTTVNHRDLWIVCRVDRILSADTAAELYMKSSSDPKAVAKLQKTVSMSLTRLAGHR 679
Query: 227 RYDTCTGIKPSHCFLLTTSQSAAISVRSE-LRASASTTAEWRRAMSRSGA 81
+ T KP L + S S S L +S ST + W S+SGA
Sbjct: 680 QRFAWTA-KPLFPELRSNHSSTISSTTSPMLSSSTSTLSGW----SKSGA 724
>AC093703-2|AAL77187.3| 473|Caenorhabditis elegans Hypothetical
protein Y20F4.2 protein.
Length = 473
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Frame = -2
Query: 568 SPARWPRSTPQRSSDRSAXQHRAARLVRVEVADECDSDGPRVVPVGVRADV---QPSRSP 398
SP +WP + R HR+ + S P G+R++ P R+P
Sbjct: 87 SPPQWPPNWQHEIQHRPIQGHRSRSPEDHMIGSASGSPSHHYHPYGMRSNGLSRSPDRTP 146
Query: 397 RTPCRYLPPGTRVRCPSIARPPCGWS 320
+Y P G P PP W+
Sbjct: 147 PQHPQYTPYGPPYNQPGQLVPPESWN 172
>AC024810-19|AAF60770.1| 427|Caenorhabditis elegans Hypothetical
protein Y54E10A.16a protein.
Length = 427
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -3
Query: 285 RPAEGCDCVLDDDEAHGPRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESEREYNCRVE 106
RP G +LD+ E GP +V +V+ D + D +G F + CRV+
Sbjct: 97 RPDRGKFTILDNAEVAGPEEVLNVNFDSEILQRIFSDPKLGIQFLARYGLIPNTRVCRVQ 156
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -2
Query: 445 VVPVGVRADVQPSRSPRTPCRYLPPGTRVRCPSIARPPCGW--SGYSAPAPRSQRP 284
VVP V P+ + P +PP T + RPPC + + + PAP P
Sbjct: 114 VVPPAVSGTSPPAPVDQKPPPCIPPTTTTTTTTTTRPPCPYPPATNTPPAPEPTLP 169
>AC006675-8|AAK84554.1| 414|Caenorhabditis elegans Hypothetical
protein M02H5.4 protein.
Length = 414
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 338 PCNTGTSDPRSWWEVTARCT---RAPAGLHVGAHT 433
PC++G+S P T +C + P G+H GA+T
Sbjct: 4 PCSSGSSPPDLTISTTKKCPVCYKPPHGIHFGAYT 38
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.6
Identities = 27/90 (30%), Positives = 32/90 (35%), Gaps = 8/90 (8%)
Frame = -2
Query: 523 RSAXQHRAARLVRVEVADECDSDGPR----VVPVGVRADVQPSRSPRTPCRYLPPGTRVR 356
R + R V E C +DGP+ V + P SP C Y+PP
Sbjct: 33 RHCGYNGCGRSVCQECPSCCGNDGPQPFNPVFNIHFNCCGAPRPSPSC-CPYVPPAPLPP 91
Query: 355 CPSIARPPCGWSGYSAPA----PRSQRPSC 278
P A P CG S AP P P C
Sbjct: 92 PPPPASPCCGPSPVPAPCCPPPPAPAAPCC 121
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 4.6
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
Frame = -2
Query: 619 RPGXSEAMSCRCATTR*SPARWPRSTPQRSSDRSAXQHRAARLVRVEVADECDSDGPRVV 440
R S + S A R SP++ P+R+ RS AR R A + P+
Sbjct: 305 RRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRA 364
Query: 439 PVGVRADVQPSRSPRTP-CRYLPPGTRVRCPSIARPPCGWSGYSAPAPRSQRPSCRR 272
R+ P+R R+P PP R R R P S +PAP+ + P RR
Sbjct: 365 KS--RSKSPPARRRRSPSASKSPPAPRRR-----RSP---SKSRSPAPKREIPPARR 411
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 412 PSRSPRTPCRYLPPGTRVRCPSIARPPCGWSGYSAPAPRSQRPSCR 275
P+ P P R PP + P + PP G AP P RP +
Sbjct: 962 PALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPRPKVK 1007
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 412 PSRSPRTPCRYLPPGTRVRCPSIARPPCGWSGYSAPAPRSQRPSCR 275
P+ P P R PP + P + PP G AP P RP +
Sbjct: 962 PALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPRPKVK 1007
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 412 PSRSPRTPCRYLPPGTRVRCPSIARPPCGWSGYSAPAPRSQRPSCR 275
P+ P P R PP + P + PP G AP P RP +
Sbjct: 962 PALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPRPKVK 1007
>U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astacin
protease protein 7 protein.
Length = 382
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 305 SSSQPASVLQKGVTVC-WTMTRLTGRARYDTCTGIKPSHC 189
+S++P+S + +TVC WT R A Y + + P C
Sbjct: 340 NSNKPSSQCEDRITVCWWTADRCRSPAIYQVMSSLCPKTC 379
>U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform c
protein.
Length = 1310
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 296 ARSWCGISRPTTWRPCNTGTSDPRSWWEVTARCTRAPAGLHVGA 427
+RSW G+SR P G+S +A R P G+ VGA
Sbjct: 1244 SRSWAGLSREVNQNPAGAGSSGTLPQHTNSAGHLRLP-GVQVGA 1286
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 296 ARSWCGISRPTTWRPCNTGTSDPRSWWEVTARCTRAPAGLHVGA 427
+RSW G+SR P G+S +A R P G+ VGA
Sbjct: 2390 SRSWAGLSREVNQNPAGAGSSGTLPQHTNSAGHLRLP-GVQVGA 2432
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,606,492
Number of Sequences: 27780
Number of extensions: 306451
Number of successful extensions: 1041
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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