Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D13
         (970 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    37   0.89 

>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 36.7 bits (81), Expect = 0.89
 Identities = 24/54 (44%), Positives = 25/54 (46%)
 Frame = +3

Query: 594 KKKKKXXXXFFFXFFXFXXXGGGXXXXKKXKXXGGGXXPPPXPPPXKXXKKXFF 755
           KKKKK    FFF FF            +K    GGG  PP  PPP K  KK FF
Sbjct: 39  KKKKKRGCLFFFFFFP---------RGEKIFFFGGGAPPP--PPPLKKKKKIFF 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,845,007
Number of Sequences: 1657284
Number of extensions: 10186306
Number of successful extensions: 87343
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63916
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 90223543267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)