BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D13
(970 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 31 6.3
AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor... 31 6.3
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 31 6.3
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 31 6.3
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 31.1 bits (67), Expect = 6.3
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +3
Query: 279 PPPXPXFXGXXXXTPPGGFFXPXKXVPXXXFFXXFFF---XXXPXXNXLXXXGPPPP 440
PPP P F TPPGGF P F F P + G PPP
Sbjct: 256 PPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPP 312
>AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor
2D/deleted in azoospermia associated protein 1 fusion p
protein.
Length = 474
Score = 31.1 bits (67), Expect = 6.3
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +3
Query: 279 PPPXPXFXGXXXXTPPGGFFXPXKXVPXXXFFXXFFF---XXXPXXNXLXXXGPPPP 440
PPP P F TPPGGF P F F P + G PPP
Sbjct: 323 PPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPP 379
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 31.1 bits (67), Expect = 6.3
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +3
Query: 279 PPPXPXFXGXXXXTPPGGFFXPXKXVPXXXFFXXFFF---XXXPXXNXLXXXGPPPP 440
PPP P F TPPGGF P F F P + G PPP
Sbjct: 167 PPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPP 223
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 31.1 bits (67), Expect = 6.3
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +3
Query: 279 PPPXPXFXGXXXXTPPGGFFXPXKXVPXXXFFXXFFF---XXXPXXNXLXXXGPPPP 440
PPP P F TPPGGF P F F P + G PPP
Sbjct: 256 PPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPP 312
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,485,589
Number of Sequences: 237096
Number of extensions: 2327907
Number of successful extensions: 20395
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15166
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12880737904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -