Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D12
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         29   3.7  
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565...    29   3.7  
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624...    29   3.7  
09_03_0007 - 11430123-11430513,11430605-11430794,11431114-114311...    29   3.7  
09_02_0181 - 5425833-5426527,5426667-5429397                           29   6.5  
07_03_0462 + 18444928-18444999,18446948-18447985,18448015-184488...    28   8.6  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = -1

Query: 368  KTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPPPICLS 225
            K+L P A PVSLP   +K SL  P  P +P S  P V K+LPPP  +S
Sbjct: 1262 KSLPPPA-PVSLPPPPVK-SL--P--PPAPVSLPPPVVKSLPPPAPVS 1303


>11_01_0687 -
           5651002-5651453,5651535-5651951,5652621-5653338,
           5654106-5654417,5654482-5654814
          Length = 743

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = +1

Query: 196 SRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTG-QAYGTRVLG 372
           SR H    TW KQ  GGK  G  G    G  G  G  R  +       TG Q YG  V  
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443

Query: 373 P--GGDSTNYGG 402
           P   G  T +GG
Sbjct: 444 PTCSGGHTGFGG 455


>10_08_0095 +
           14760292-14760624,14760689-14761000,14761768-14762489,
           14762905-14763187,14763419-14763650,14763736-14764187
          Length = 777

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = +1

Query: 196 SRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTG-QAYGTRVLG 372
           SR H    TW KQ  GGK  G  G    G  G  G  R  +       TG Q YG  V  
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443

Query: 373 P--GGDSTNYGG 402
           P   G  T +GG
Sbjct: 444 PTCSGGHTGFGG 455


>09_03_0007 -
           11430123-11430513,11430605-11430794,11431114-11431182,
           11431601-11431727,11431843-11432083,11432519-11432596,
           11433004-11433109,11433560-11433625,11437021-11437043,
           11438106-11438177,11438256-11438394,11439505-11439919
          Length = 638

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
 Frame = +1

Query: 154 PSDYAEDYSISGQSSRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRG 333
           PS +A D  I   +S   PR ++ D  +    + G +  N   L      N  + N   G
Sbjct: 162 PSQFAWDGVICRNTSDNIPRIISLD--LSNSNLHGVISNNFTLLTALENLNNFVPNIAVG 219

Query: 334 KLTGQ---AYGTRVLGPGGDSTNYGGRLDW-GEQE 426
           K+      + G      GGDS N   +LDW GE E
Sbjct: 220 KVKKDDMVSKGEVKKVKGGDSQNLDEKLDWLGELE 254


>09_02_0181 - 5425833-5426527,5426667-5429397
          Length = 1141

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
 Frame = +1

Query: 190  QSSRRHPRDVTWDKQMGGGKVFGTLGQN-DDGLFGKAGYNREIFNDDRGKLTGQAYGTRV 366
            QS RR  +   W K++GG     +  +N DDG  G               + G  + T  
Sbjct: 959  QSRRRAEKAAAWPKRLGGTGPCASRTENADDGAAGGGDGGSTWGGGSGAPMAGSGFPTHG 1018

Query: 367  LGPGGDSTNYGG 402
             G  G+  + GG
Sbjct: 1019 SGRRGERRDGGG 1030


>07_03_0462 +
           18444928-18444999,18446948-18447985,18448015-18448845,
           18449112-18449120
          Length = 649

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = +1

Query: 352 YGTRVLGPGGDSTNYGGRLDWGEQECTSHY 441
           YGT VLG GG S  Y G+LD G       Y
Sbjct: 79  YGT-VLGKGGFSVVYKGKLDNGRSVAVKQY 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,228,461
Number of Sequences: 37544
Number of extensions: 474283
Number of successful extensions: 1352
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)