Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D06
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0063 - 630345-633743                                             30   3.0  
12_02_0237 - 16087083-16087201,16087531-16088341,16097713-16098156     29   3.9  
12_01_0296 + 2240376-2240580,2241556-2241764,2241847-2241975,224...    29   3.9  
12_01_0493 + 3917257-3917769,3917842-3918067,3918460-3918527,391...    29   5.2  

>04_01_0063 - 630345-633743
          Length = 1132

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +1

Query: 43  FCQFASPAPPCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNEL 219
           F       PP   V +  GL CP SQ     IQ   G RC S    +    +F N+ +L
Sbjct: 714 FSSVQHSCPPDLQVEILEGL-CPPSQLTELEIQQYNGLRCPSWLSSENQNGIFTNLQDL 771


>12_02_0237 - 16087083-16087201,16087531-16088341,16097713-16098156
          Length = 457

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/62 (24%), Positives = 29/62 (46%)
 Frame = +1

Query: 322 VQGRIPSQEIWNSRIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAY 501
           + GRIP+  + N   +    + E + ++ L +   DF+ F     +  +YMN G    +Y
Sbjct: 395 IGGRIPTVSLPNMTSYQFMCKNENVNIYSLCFILYDFQAF---PIFINIYMNVGNARKSY 451

Query: 502 YI 507
            +
Sbjct: 452 IV 453


>12_01_0296 +
           2240376-2240580,2241556-2241764,2241847-2241975,
           2242271-2242417,2243045-2243108,2243208-2243311,
           2243373-2243411
          Length = 298

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +1

Query: 259 NIEASKDCYTNMKAYENFMNDVQGRIPSQEIWNSRIFYEKMREEAIALFKLFYYAKDFE 435
           ++++  D ++N +   +F  D    I S        FY K+REE + +  +F   KDF+
Sbjct: 125 SVQSPSDMFSNNEMNSSFETDENHSIKSSSDRTLIDFYHKLREETLTV--IFRNGKDFK 181


>12_01_0493 +
           3917257-3917769,3917842-3918067,3918460-3918527,
           3919251-3919574,3919691-3920128
          Length = 522

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 755 LTEDVGLNAYYYYFHSHLPFWVELWVKYGAFKERRG 862
           LT+  GL+      ++HL  W  +WV+ G  K+  G
Sbjct: 320 LTDHYGLDTSGTQVYNHLRKWRSMWVRIGRLKDLSG 355


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,494,211
Number of Sequences: 37544
Number of extensions: 345267
Number of successful extensions: 712
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)