Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D06
(917 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14680-1|AAA73985.1| 1863|Homo sapiens breast and ovarian cancer... 31 7.7
L78833-1|AAC37594.1| 1863|Homo sapiens BRCA1 protein. 31 7.7
DQ478408-3|ABF14462.1| 1822|Homo sapiens early onset breast canc... 31 7.7
DQ190457-3|ABA29229.1| 1822|Homo sapiens breast cancer 1 early o... 31 7.7
DQ190456-3|ABA29226.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.7
DQ190455-3|ABA29223.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.7
DQ190454-3|ABA29220.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.7
DQ190453-3|ABA29217.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.7
DQ190452-3|ABA29214.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.7
DQ190451-3|ABA29211.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.7
DQ190450-3|ABA29208.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.7
BC115037-1|AAI15038.1| 1354|Homo sapiens BRCA1 protein protein. 31 7.7
AY751490-1|AAU93634.1| 1841|Homo sapiens breast and ovarian canc... 31 7.7
AY354539-1|AAQ92977.1| 1399|Homo sapiens IRIS protein. 31 7.7
AY304547-1|AAP70031.1| 1141|Homo sapiens breast and ovarian canc... 31 7.7
AY273801-1|AAP12647.1| 1863|Homo sapiens breast cancer 1, early ... 31 7.7
AF005068-1|AAB61673.1| 1792|Homo sapiens breast and ovarian canc... 31 7.7
>U14680-1|AAA73985.1| 1863|Homo sapiens breast and ovarian cancer
susceptibility protein.
Length = 1863
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>L78833-1|AAC37594.1| 1863|Homo sapiens BRCA1 protein.
Length = 1863
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>DQ478408-3|ABF14462.1| 1822|Homo sapiens early onset breast cancer 1
protein.
Length = 1822
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>DQ190457-3|ABA29229.1| 1822|Homo sapiens breast cancer 1 early onset
protein.
Length = 1822
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>DQ190456-3|ABA29226.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>DQ190455-3|ABA29223.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>DQ190454-3|ABA29220.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>DQ190453-3|ABA29217.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>DQ190452-3|ABA29214.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>DQ190451-3|ABA29211.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>DQ190450-3|ABA29208.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>BC115037-1|AAI15038.1| 1354|Homo sapiens BRCA1 protein protein.
Length = 1354
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 694 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 750
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 751 QEHHLSEETKCSASL 765
>AY751490-1|AAU93634.1| 1841|Homo sapiens breast and ovarian cancer
susceptibility protein protein.
Length = 1841
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>AY354539-1|AAQ92977.1| 1399|Homo sapiens IRIS protein.
Length = 1399
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>AY304547-1|AAP70031.1| 1141|Homo sapiens breast and ovarian cancer
susceptibility protein protein.
Length = 1141
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1000 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1056
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1057 QEHHLSEETKCSASL 1071
>AY273801-1|AAP12647.1| 1863|Homo sapiens breast cancer 1, early onset
protein.
Length = 1863
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1224 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1280
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1281 QEHHLSEETKCSASL 1295
>AF005068-1|AAB61673.1| 1792|Homo sapiens breast and ovarian cancer
susceptibility protein splice variant protein.
Length = 1792
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 70 PCXFVLLXAGLSCPRSQSHRTXIQNATGXRCVSSKKQKQLLSLFXNVNELSYEAEXYKVA 249
PC LL ++ SQS R + C+S ++ LLSL ++N+ S + K +
Sbjct: 1153 PCFQHLLFGKVNNIPSQSTR---HSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKAS 1209
Query: 250 QDFNIEASKDCYTNM 294
Q+ ++ C ++
Sbjct: 1210 QEHHLSEETKCSASL 1224
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,123,808
Number of Sequences: 237096
Number of extensions: 1966196
Number of successful extensions: 8414
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8414
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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