Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D04
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0355 - 3122374-3122520,3122912-3123047,3123124-3123221,312...    66   5e-11
10_08_0391 + 17486109-17486210,17487032-17487129,17487331-174873...    29   5.1  
06_03_0635 - 22971502-22973840,22974112-22974403,22974639-229751...    28   8.9  

>08_01_0355 -
           3122374-3122520,3122912-3123047,3123124-3123221,
           3123724-3123801,3123876-3123945,3124452-3124516,
           3124606-3124686,3124822-3124926,3125002-3125085,
           3125175-3125250,3125358-3125436,3125526-3125646,
           3125768-3125827
          Length = 399

 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 8/231 (3%)
 Frame = +1

Query: 241 PTDATTNPSLILSAAGYGNS-ISTFLDKAIKYGKDKWEAH*KKQVG*XFGIC*VVLFGL* 417
           PT AT + SL+L  AG  ++   + +D A+  G+       + ++   F    +   G  
Sbjct: 90  PTAATVSSSLLLGIAGLPDTKFKSAIDTALADGECNTMEKPEDRMS-CFLTKALANVGA- 147

Query: 418 NY*XLFLGRVSVES*CRLSFDKDASIAKAXNLSFIC*TW--Y*KEXFXKLASTWEGFKQP 591
               L  GRVS E   RL++D    I +   L  +        +    K+ +TW+G +  
Sbjct: 148 EMAHLVPGRVSTEIDARLAYDTQGIIQRVHELLKLYSDHDVLSERLLFKIPATWQGIEAS 207

Query: 592 RVGEEAWNHCNLTLLFSLYQAIACAEANVTLISPFVGRILDWYVEHT-----KKTYEGQE 756
           R+ E      +LT ++S  QA A A+A  +++  FVGR+ DW   H+      +  +  E
Sbjct: 208 RLLESEGIQTHLTFVYSFAQAAAAAQAGASVVQIFVGRVRDWARTHSGDPEIDEALKKGE 267

Query: 757 DPGVVSVTXXXXXXXXXXXXTXVMGASFRNTGEIRELXGCDLLTXSPKLLQ 909
           D G+                T +M A+ RN  ++  L G D +    K+LQ
Sbjct: 268 DAGLALAKKVYAYIHKNGYKTKLMAAAIRNKQDVFSLLGIDYIIAPLKILQ 318


>10_08_0391 +
           17486109-17486210,17487032-17487129,17487331-17487361,
           17487655-17487707,17489254-17489402,17489828-17489898,
           17489988-17490131,17490249-17490309,17492180-17492265,
           17492839-17492926,17494012-17494142,17494266-17494394
          Length = 380

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 262 PSLILSAAGYGNSISTFLDKAIKYG 336
           P  +L+  GY NS+ TF+DKA++ G
Sbjct: 168 PVGLLNVDGYYNSLLTFIDKAVEEG 192


>06_03_0635 -
           22971502-22973840,22974112-22974403,22974639-22975162,
           22975314-22975583,22976393-22977124,22977226-22977310
          Length = 1413

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 634 LFSLYQAIACAEANVTLISPFVGRILDWYVEHTKKTYEGQE 756
           ++ L  A A  EA +   S     ILDW V H+ K Y  +E
Sbjct: 727 IYDLENAKAAEEAKLLNKSHLHKLILDWNVNHSTKDYSQEE 767


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,984,653
Number of Sequences: 37544
Number of extensions: 457634
Number of successful extensions: 1086
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)