Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D04
         (910 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   2.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   2.2  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   6.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   6.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   6.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   6.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   8.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   8.9  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 774 GNYSGVFLALISLLCMFNIP 715
           G+YS V L + +LL +F+IP
Sbjct: 76  GSYSSVSLQVANLLRLFHIP 95


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 774 GNYSGVFLALISLLCMFNIP 715
           G+YS V L + +LL +F+IP
Sbjct: 166 GSYSSVSLQVANLLRLFHIP 185


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 612 PCFFSNSWLLESFPSGGQFXKXF 544
           PC F N+ ++ + P   +  K F
Sbjct: 235 PCIFDNATIVNNGPEAAKMAKAF 257


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 151 FSSVSYSGSPLHTDLMKYCTGCKFSNTNLI 62
           FS     G+PL + L + C G   SN + I
Sbjct: 530 FSGSCAPGAPLDSKLCQQCVGNLASNNDRI 559


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 151 FSSVSYSGSPLHTDLMKYCTGCKFSNTNLI 62
           FS     G+PL + L + C G   SN + I
Sbjct: 530 FSGSCAPGAPLDSKLCQQCVGNLASNNDRI 559


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 151 FSSVSYSGSPLHTDLMKYCTGCKFSNTNLI 62
           FS     G+PL + L + C G   SN + I
Sbjct: 530 FSGSCAPGAPLDSKLCQQCVGNLASNNDRI 559


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 381 VSAHLFLSMSFPFILSIF 328
           VS  LFL +  PF LS+F
Sbjct: 77  VSDLLFLILGLPFELSVF 94


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 252 SICRLYILSW 223
           +IC LY+LSW
Sbjct: 278 TICFLYVLSW 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,519
Number of Sequences: 438
Number of extensions: 4890
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)