Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D03
         (879 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...   113   4e-25
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...   113   4e-25
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...   113   4e-25
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...   106   3e-23
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ...    29   8.5  

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score =  113 bits (271), Expect = 4e-25
 Identities = 56/73 (76%), Positives = 64/73 (87%)
 Frame = +2

Query: 137 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 316
           M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60

Query: 317 TKHRLWSGCCSGP 355
           T   + SG  + P
Sbjct: 61  T--NIGSGVGAAP 71


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score =  113 bits (271), Expect = 4e-25
 Identities = 56/73 (76%), Positives = 64/73 (87%)
 Frame = +2

Query: 137 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 316
           M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60

Query: 317 TKHRLWSGCCSGP 355
           T   + SG  + P
Sbjct: 61  T--NIGSGVGAAP 71


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score =  113 bits (271), Expect = 4e-25
 Identities = 56/73 (76%), Positives = 64/73 (87%)
 Frame = +2

Query: 137 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 316
           M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60

Query: 317 TKHRLWSGCCSGP 355
           T   + SG  + P
Sbjct: 61  T--NIGSGVGAAP 71


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score =  106 bits (255), Expect = 3e-23
 Identities = 54/73 (73%), Positives = 62/73 (84%)
 Frame = +2

Query: 137 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 316
           M +KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+DLI
Sbjct: 1   MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60

Query: 317 TKHRLWSGCCSGP 355
           T   + SG  + P
Sbjct: 61  T--NIGSGVGAAP 71


>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
           protein.
          Length = 1047

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 318 VIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEI 217
           +I S+ L+P+K   N P QY  T+   A K  +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,396,386
Number of Sequences: 53049
Number of extensions: 413662
Number of successful extensions: 1185
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)