Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D02
(878 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.40
02_05_0868 + 32342967-32343915,32344389-32344447 33 0.40
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.40
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 32 0.53
12_02_1174 - 26696869-26698191 32 0.70
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 32 0.70
06_01_0817 - 6185881-6187074 31 1.2
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668... 31 1.2
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 2.1
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 3.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.9
01_01_0070 - 542603-542686,542803-543441 29 6.5
05_03_0458 + 14280953-14281866,14281964-14282912 28 8.6
03_01_0515 - 3864796-3865425 28 8.6
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 32.7 bits (71), Expect = 0.40
Identities = 27/94 (28%), Positives = 31/94 (32%)
Frame = +1
Query: 577 PXPVKRXRCWRXP*APPPXTSIQKSPPPQRWXNPTGLXRXXAXPPGXSLVXLSCPDPARL 756
P P+ + P APP I PPP GL A PP + P A
Sbjct: 1124 PPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVG---GLGGPPAPPPPAGFRGGTPPPNAHG 1180
Query: 757 PXTCPPFXPXGKRGXXXXPPAXXFPIPXLXPSXP 858
PP P G G P P P + P P
Sbjct: 1181 GVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVP 1214
>02_05_0868 + 32342967-32343915,32344389-32344447
Length = 335
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 562 KAXKRPXPVKRXRCWRXP*APPPXTSIQKSPPPQRWXNPTGLXRXXAXPP 711
+A ++P P R +R P P P S +PP +R +P + R + PP
Sbjct: 96 RAFRQPAPAVPGRAFRQP-GPAPAPSPAPAPPRRRMPSPPPVARRPSTPP 144
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.40
Identities = 21/66 (31%), Positives = 25/66 (37%)
Frame = +1
Query: 619 APPPXTSIQKSPPPQRWXNPTGLXRXXAXPPGXSLVXLSCPDPARLPXTCPPFXPXGKRG 798
APPP + +PPP P PP P P + P PP P GK+G
Sbjct: 325 APPPPPPPKAAPPPPPPKGPPPPPPAKGPPP---------PPPPKGPSPPPPPPPGGKKG 375
Query: 799 XXXXPP 816
PP
Sbjct: 376 GPPPPP 381
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 32.3 bits (70), Expect = 0.53
Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Frame = +1
Query: 613 P*APPPXTSIQKSPPPQRW-XNPTGLXRXXAXPPGXSLVXLSCPDPARLPXTCPPFXPXG 789
P APPP S +++PP R+ T + P + + P P P PP P
Sbjct: 307 PPAPPPARS-RRTPPRTRFSTGSTPDTKQVTSPSPRPVQPSNAPPPPPPPPPPPPPPPPP 365
Query: 790 KRGXXXXPPAXXFPIPXLXPSXPXXGRVP 876
K PP P P PS P +P
Sbjct: 366 KLNTAPKPP----PPPPPPPSVPSNNNLP 390
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.9 bits (69), Expect = 0.70
Identities = 27/96 (28%), Positives = 31/96 (32%), Gaps = 1/96 (1%)
Frame = +1
Query: 574 RPXPVKRXRCWRXP*APPPXTSIQKSPPPQRWXNPTGLXRXXAXPPGXSLVXLSCPDPAR 753
RP PVK P PPP PP P + PP P P R
Sbjct: 140 RPPPVKPQPPPSLPPPPPPPPPPPPPRPPS--VKPPVVQPKPQPPPSLQPPSPPPPPPTR 197
Query: 754 LPXTCPP-FXPXGKRGXXXXPPAXXFPIPXLXPSXP 858
P PP P + PP+ P P + P P
Sbjct: 198 PPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTP 233
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 31.9 bits (69), Expect = 0.70
Identities = 26/88 (29%), Positives = 30/88 (34%)
Frame = +1
Query: 613 P*APPPXTSIQKSPPPQRWXNPTGLXRXXAXPPGXSLVXLSCPDPARLPXTCPPFXPXGK 792
P APPP ++Q PP Q P L P S S P R P PP P
Sbjct: 277 PNAPPPPPTLQSQPPSQ---YPGHLPHSQVPPVPPSAPVPSVPALPRDPYYAPPAQPTET 333
Query: 793 RGXXXXPPAXXFPIPXLXPSXPXXGRVP 876
P P P P+ P + P
Sbjct: 334 MHQQYQAP--PVPQPQAPPAPPQQYQTP 359
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Frame = +1
Query: 625 PPXTSIQKSP-PPQRWXNPTGLXRXXAXPPGXSLVXLSCPDP---ARLPXTCPPFXPXGK 792
PP Q P PPQ++ P + + PP +V S P P + P + P
Sbjct: 341 PPVPQPQAPPAPPQQYQTPPQFPQ-YSQPPQSGMVNPSTPLPPAAPQQPEEAMSYAPPQS 399
Query: 793 RGXXXXPPAXXFPIPXLXPSXPXXGR 870
PP+ P P P+ P G+
Sbjct: 400 YPPNVRPPSPYMP-PPSGPAPPFYGQ 424
>06_01_0817 - 6185881-6187074
Length = 397
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +1
Query: 622 PPPXTSIQKSPPPQRWXNPTGLXRXXAXPPGXSLVXLSCPDPARLPXTCPPF 777
PPP ++ SPPP P + A ++V P P +P PPF
Sbjct: 43 PPPWSASSDSPPPA--YRPIRMPAINAPTNTAAIVLSPVPQPLPVPPASPPF 92
>01_05_0501 +
22764978-22765896,22766087-22766349,22766613-22766836,
22767419-22767749,22767968-22768372
Length = 713
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 707 PXEXPSXXSPVPTLPXYRIP--VPPFXLXXNVGPXPXPXXXXSXFPXXVR 850
P P PVP P Y + VPP+ + ++ P P P P +R
Sbjct: 79 PPPPPPPPPPVPVPPAYSVTSSVPPYSMTSSLPPSPRPPPPLPFSPIVIR 128
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/82 (26%), Positives = 25/82 (30%)
Frame = +1
Query: 613 P*APPPXTSIQKSPPPQRWXNPTGLXRXXAXPPGXSLVXLSCPDPARLPXTCPPFXPXGK 792
P P P + PPP P PP L+ P PA + T P P
Sbjct: 60 PPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPP-PPLLPTPPPPPASISPTPAPPLPPPP 118
Query: 793 RGXXXXPPAXXFPIPXLXPSXP 858
P FP PS P
Sbjct: 119 APAPPPTPTPKFPSSSANPSPP 140
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/70 (27%), Positives = 21/70 (30%)
Frame = +1
Query: 622 PPPXTSIQKSPPPQRWXNPTGLXRXXAXPPGXSLVXLSCPDPARLPXTCPPFXPXGKRGX 801
PPP S PP NP A PP + P P P T P
Sbjct: 439 PPPYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQYAPPPAPIPPPGTAPSTDGAQNYPP 498
Query: 802 XXXPPAXXFP 831
PP+ P
Sbjct: 499 GVTPPSSGAP 508
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +2
Query: 707 PXEXPSXXSPVPTLPXYRIPVPPFXLXXNVGPXPXPXXXXSXFPXXVRP 853
P + P P+P P P PP L ++ P P P S P P
Sbjct: 1150 PSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAP 1198
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/80 (27%), Positives = 27/80 (33%)
Frame = +1
Query: 619 APPPXTSIQKSPPPQRWXNPTGLXRXXAXPPGXSLVXLSCPDPARLPXTCPPFXPXGKRG 798
APPP + + PPP +P PP + P+ P PP P G
Sbjct: 1136 APPPPP-LPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPP 1194
Query: 799 XXXXPPAXXFPIPXLXPSXP 858
PP P P P P
Sbjct: 1195 QPAPPPLPIQPPPIPPPPVP 1214
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/73 (32%), Positives = 29/73 (39%)
Frame = +1
Query: 613 P*APPPXTSIQKSPPPQRWXNPTGLXRXXAXPPGXSLVXLSCPDPARLPXTCPPFXPXGK 792
P PPP T +K+PPP P + PP S + P PA LP + PP
Sbjct: 79 PVTPPPPTP-KKAPPPP--VTPPPVTPPPVTPPPVS-PPPATPPPA-LPPSTPPPVAAPA 133
Query: 793 RGXXXXPPAXXFP 831
PPA P
Sbjct: 134 EAPAALPPATTPP 146
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +2
Query: 707 PXEXPSXXSPVPTLPXYRIPVPPFXLXXNVGPXPXPXXXXSXFP 838
P PS P+P L P+PP L + P P P + P
Sbjct: 58 PSSSPSSPPPLPPLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSP 101
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +1
Query: 619 APPPXTSIQKSPP-PQRWXNPTGLXRXXAXPPGXSLVXLSCPDPARLPXTCPPFXPXGKR 795
AP P + SPP P +P L A PP V S P PA P PP P
Sbjct: 28 APAPSPEAEASPPSPPTEASPPPL----APPPS---VTSSPPPPAAGPLMPPPPPPPSVT 80
Query: 796 GXXXXPPAXXFPIPXLXPSXP 858
PP P P P
Sbjct: 81 SSPPPPPLPPPPPPPAASPPP 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,995,987
Number of Sequences: 37544
Number of extensions: 207510
Number of successful extensions: 799
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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