BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_D01 (923 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z49067-1|CAA88849.2| 376|Caenorhabditis elegans Hypothetical pr... 33 0.38 Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 30 2.7 Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 30 2.7 >Z49067-1|CAA88849.2| 376|Caenorhabditis elegans Hypothetical protein C44F1.2 protein. Length = 376 Score = 32.7 bits (71), Expect = 0.38 Identities = 21/58 (36%), Positives = 31/58 (53%) Frame = -3 Query: 246 NQRNSRVVIGSGDSIDEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLHLDSLGS 73 N+R+ V+ SGD EP +S SGQ + K G GR AG++ KL ++ + S Sbjct: 174 NKRHLEDVLASGDDASEPTEQS--SGQISEEPIKKRGRGRP-AGKKNKAKLEINFVES 228 >Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein R10E11.1b protein. Length = 2056 Score = 29.9 bits (64), Expect = 2.7 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%) Frame = -3 Query: 375 DDFLTLPD--PQFVGEL*NIPIAVSDEIVDGILDDASTRLFLEQQNQRNSRVVIGSGDSI 202 DD LT P P F G+ P + D I + ++A ++ + + ++ +G GDS Sbjct: 1319 DDNLTTPTQLPYFEGDF--WPNVIEDCIREASNEEAQRKVKEDDDDGEDADGGLGGGDSG 1376 Query: 201 DEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLH 91 + ++ ++ N ++NK AG G E KL+ Sbjct: 1377 KKKSSKNKKNNLKKNAKMNKKKAG-SITGNEVADKLY 1412 >Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein R10E11.1a protein. Length = 2045 Score = 29.9 bits (64), Expect = 2.7 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%) Frame = -3 Query: 375 DDFLTLPD--PQFVGEL*NIPIAVSDEIVDGILDDASTRLFLEQQNQRNSRVVIGSGDSI 202 DD LT P P F G+ P + D I + ++A ++ + + ++ +G GDS Sbjct: 1308 DDNLTTPTQLPYFEGDF--WPNVIEDCIREASNEEAQRKVKEDDDDGEDADGGLGGGDSG 1365 Query: 201 DEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLH 91 + ++ ++ N ++NK AG G E KL+ Sbjct: 1366 KKKSSKNKKNNLKKNAKMNKKKAG-SITGNEVADKLY 1401 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,632,890 Number of Sequences: 27780 Number of extensions: 342652 Number of successful extensions: 1181 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1012 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1181 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2370744068 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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