Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D01
         (923 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49067-1|CAA88849.2|  376|Caenorhabditis elegans Hypothetical pr...    33   0.38 
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr...    30   2.7  
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr...    30   2.7  

>Z49067-1|CAA88849.2|  376|Caenorhabditis elegans Hypothetical
           protein C44F1.2 protein.
          Length = 376

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = -3

Query: 246 NQRNSRVVIGSGDSIDEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLHLDSLGS 73
           N+R+   V+ SGD   EP  +S  SGQ     + K G GR  AG++   KL ++ + S
Sbjct: 174 NKRHLEDVLASGDDASEPTEQS--SGQISEEPIKKRGRGRP-AGKKNKAKLEINFVES 228


>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
            R10E11.1b protein.
          Length = 2056

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = -3

Query: 375  DDFLTLPD--PQFVGEL*NIPIAVSDEIVDGILDDASTRLFLEQQNQRNSRVVIGSGDSI 202
            DD LT P   P F G+    P  + D I +   ++A  ++  +  +  ++   +G GDS 
Sbjct: 1319 DDNLTTPTQLPYFEGDF--WPNVIEDCIREASNEEAQRKVKEDDDDGEDADGGLGGGDSG 1376

Query: 201  DEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLH 91
             +   ++ ++    N ++NK  AG    G E   KL+
Sbjct: 1377 KKKSSKNKKNNLKKNAKMNKKKAG-SITGNEVADKLY 1412


>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
            R10E11.1a protein.
          Length = 2045

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = -3

Query: 375  DDFLTLPD--PQFVGEL*NIPIAVSDEIVDGILDDASTRLFLEQQNQRNSRVVIGSGDSI 202
            DD LT P   P F G+    P  + D I +   ++A  ++  +  +  ++   +G GDS 
Sbjct: 1308 DDNLTTPTQLPYFEGDF--WPNVIEDCIREASNEEAQRKVKEDDDDGEDADGGLGGGDSG 1365

Query: 201  DEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLH 91
             +   ++ ++    N ++NK  AG    G E   KL+
Sbjct: 1366 KKKSSKNKKNNLKKNAKMNKKKAG-SITGNEVADKLY 1401


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,632,890
Number of Sequences: 27780
Number of extensions: 342652
Number of successful extensions: 1181
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)