Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C22
         (907 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   7.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   7.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   7.6  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 819 CNYFXXKXKXVIXIYVIXTFYLI 887
           C+YF  + K V+ +  +   YLI
Sbjct: 356 CDYFTIETKTVLDVLGVTVTYLI 378


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 819 CNYFXXKXKXVIXIYVIXTFYLI 887
           C+YF  + K V+ +  +   YLI
Sbjct: 282 CDYFTIETKTVLDVLGVTVTYLI 304


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 111 SPCFLSSCNETASRET 64
           SP F S+   TASRET
Sbjct: 115 SPLFHSAAPRTASRET 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,367
Number of Sequences: 336
Number of extensions: 2448
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)