Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C22
         (907 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805...    29   5.1  
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333...    28   8.9  

>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
            8057595-8058314,8058404-8058603,8058988-8059172,
            8059287-8059354,8059432-8060246,8060502-8060599,
            8060702-8060887,8061358-8061538,8061651-8061812,
            8061894-8061937,8062059-8062115,8062409-8062505,
            8062614-8062786,8062868-8063081,8063270-8063395,
            8064072-8064188,8064459-8064566,8064729-8064898,
            8065049-8065127,8065211-8065285,8065845-8065942,
            8066030-8066137,8066238-8066295,8066527-8066631,
            8067461-8069516,8069804-8070697,8070896-8071852,
            8072022-8072075,8072157-8072222,8072294-8073472,
            8073868-8075598,8075764-8075829,8076763-8077788,
            8077893-8078041
          Length = 4264

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 167  LSCSTQDITPSSSMRIFFEAHVSSAHATRPHLVKRLGFQEPTQ 39
            +  ST DI P+  +R  FE+HVS    ++P  +  L  +E +Q
Sbjct: 2761 IGASTNDIAPACELRKDFESHVSGC-VSKPVGLSELRLEELSQ 2802


>08_02_1322 +
           26131395-26131599,26132382-26132468,26133119-26133372,
           26133430-26133526,26133613-26133693,26133782-26133976,
           26134093-26134182,26134296-26134471,26134565-26134687,
           26134799-26134945,26135027-26135163,26135247-26135364,
           26135462-26135518
          Length = 588

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +3

Query: 177 TRSKTKHEPLRVRKDYGFVQNQRPGTGXQPKAPVGAKI 290
           T  K +   L V+  YGF +N RP  G +   P  A +
Sbjct: 227 TMKKAEKVLLTVKPQYGFGENGRPAAGEEGAVPPNATL 264


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,678,831
Number of Sequences: 37544
Number of extensions: 248036
Number of successful extensions: 514
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)