Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C19
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    30   2.4  
U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +1

Query: 178 KGAHSVLYCPQMAEPDCXXXXXXXXXXXXGPCDVPQCFCDRPNVRNTKTGKCVPESEC 351
           +G   +  C    EP C              C    C C +  VR++ TGKCV +++C
Sbjct: 78  EGDEELKACGSACEPTCDNENPECDLV----CMTNVCQCKKGLVRDSATGKCVEKNKC 131


>U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical
           protein C05D9.3 protein.
          Length = 423

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +1

Query: 169 KCPKGAHSVLYCPQMAEPDCXXXXXXXXXXXXGPCDVPQCFCDRPNV 309
           +CP  +H V    ++ E  C            G C   QC C++P V
Sbjct: 253 ECPLASHGVSKASEL-EDKCRFNSSSPVCSASGKCKCGQCQCNKPTV 298


>Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical
           protein M02G9.2 protein.
          Length = 398

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 280 PQCFCDRPNVRNTKTGKCVPESEC**NCVN 369
           P+C C   NVRN  TG  +P      NCV+
Sbjct: 63  PKCVCTEGNVRNIITGPSLPALFKPYNCVS 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,016,679
Number of Sequences: 27780
Number of extensions: 240463
Number of successful extensions: 611
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)