Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C17
         (1081 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0229 + 2425090-2425819,2426602-2426720                           29   4.8  
01_01_0800 - 6221306-6223016,6223418-6223443,6223653-6223664           29   4.8  
07_01_0182 + 1280479-1280754,1281232-1282089                           29   8.4  

>10_01_0229 + 2425090-2425819,2426602-2426720
          Length = 282

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +3

Query: 495 SKXSXWWNQEVAPNLKKGWYSASGGLXGPCVPWLLGNXXC 614
           SK   W N   AP     + S S  L G  + WLLGN  C
Sbjct: 65  SKTGNWGNVVSAPISPGDYMSFSSILDGDFLYWLLGNHGC 104


>01_01_0800 - 6221306-6223016,6223418-6223443,6223653-6223664
          Length = 582

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 540 SSLEQLLGSTXNFXLKKPFGSEGGHPVFGPLGFSFQI 430
           +S+ QL GS+  + L  P G  GGH      GF  Q+
Sbjct: 107 ASVRQLSGSSAEYALLSPMGDAGGHSHHHQHGFQPQL 143


>07_01_0182 + 1280479-1280754,1281232-1282089
          Length = 377

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -2

Query: 486 FGSEGGHP---VFGPLGFSFQIFPGFFPRKPIFKIRTPRFP 373
           +G  GG+P    +  +G    I PG   R+P++    P FP
Sbjct: 281 YGMGGGYPYANAYSNMGAPANIPPGMMTRRPVYGAYPPMFP 321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,406,943
Number of Sequences: 37544
Number of extensions: 574835
Number of successful extensions: 1213
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3222906096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)