Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_C17
(1081 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY360320-1|AAR12276.1| 709|Homo sapiens lactoferrin protein. 35 0.45
X53961-1|CAA37914.1| 711|Homo sapiens precursor (AA -19 to 692)... 33 1.4
X52941-1|CAA37116.1| 709|Homo sapiens protein ( Human LTF mRNA ... 33 1.4
U95626-5|AAB57795.1| 475|Homo sapiens lactoferrin protein. 33 1.4
U07643-1|AAB60324.1| 711|Homo sapiens lactoferrin protein. 33 1.4
M93150-1|AAA36159.1| 711|Homo sapiens lactoferrin protein. 33 1.4
M83205-1|AAA58656.1| 706|Homo sapiens HLF2 protein. 33 1.4
M83202-1|AAA59511.1| 711|Homo sapiens lactoferrin protein. 33 1.4
M73700-1|AAA59479.1| 710|Homo sapiens neutrophil lactoferrin pr... 33 1.4
DQ522304-1|ABF69105.1| 353|Homo sapiens lactoferrin protein. 33 1.4
BC022347-1|AAH22347.1| 711|Homo sapiens lactotransferrin protein. 33 1.4
BC015823-1|AAH15823.1| 711|Homo sapiens lactotransferrin protein. 33 1.4
BC015822-1|AAH15822.1| 711|Homo sapiens lactotransferrin protein. 33 1.4
AY875691-1|AAW71443.1| 711|Homo sapiens lactoferrin protein. 33 1.4
AY493417-1|AAS72878.1| 711|Homo sapiens growth-inhibiting prote... 33 1.4
AY178998-1|AAN75578.2| 711|Homo sapiens lactoferrin protein. 33 1.4
AY165046-1|AAN63998.1| 711|Homo sapiens lactotransferrin precur... 33 1.4
AY137470-1|AAN11304.1| 711|Homo sapiens lactoferrin protein. 33 1.4
AF332168-1|AAG48753.1| 711|Homo sapiens lactoferrin precursor p... 33 1.4
DQ854807-1|ABI23973.1| 365|Homo sapiens visual system homeobox ... 32 4.2
BC126228-1|AAI26229.1| 365|Homo sapiens visual system homeobox ... 32 4.2
BC041560-1|AAH41560.1| 859|Homo sapiens ABCC4 protein protein. 32 4.2
AY207008-1|AAO37649.1| 1325|Homo sapiens ATP-binding cassette tr... 32 4.2
AY081219-1|AAL88745.1| 1325|Homo sapiens multidrug resistance-as... 32 4.2
AL356257-1|CAI16722.1| 1325|Homo sapiens ATP-binding cassette, s... 32 4.2
AL157818-1|CAC36037.2| 1325|Homo sapiens ATP-binding cassette, s... 32 4.2
AL139381-1|CAI16589.1| 1325|Homo sapiens ATP-binding cassette, s... 32 4.2
AL080312-3|CAI18918.1| 365|Homo sapiens visual system homeobox ... 32 4.2
AF541977-1|AAN17334.1| 1278|Homo sapiens ATP-binding cassette pr... 32 4.2
AF251033-1|AAF99656.1| 365|Homo sapiens homeodomain protein RIN... 32 4.2
AF176797-1|AAF37425.2| 365|Homo sapiens transcription factor VS... 32 4.2
AF071203-1|AAC27077.1| 893|Homo sapiens ABC transporter MOAT-B ... 32 4.2
AF071202-1|AAC27076.1| 1325|Homo sapiens ABC transporter MOAT-B ... 32 4.2
AB208973-1|BAD92210.1| 776|Homo sapiens ABCC4 protein variant p... 32 4.2
>AY360320-1|AAR12276.1| 709|Homo sapiens lactoferrin protein.
Length = 709
Score = 35.1 bits (77), Expect = 0.45
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S + V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGSSRVPPRIDSGLYLGSG 343
>X53961-1|CAA37914.1| 711|Homo sapiens precursor (AA -19 to 692)
protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>X52941-1|CAA37116.1| 709|Homo sapiens protein ( Human LTF mRNA for
lactoferrin (lactotransferrin). ).
Length = 709
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 289 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 341
>U95626-5|AAB57795.1| 475|Homo sapiens lactoferrin protein.
Length = 475
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 55 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 107
>U07643-1|AAB60324.1| 711|Homo sapiens lactoferrin protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>M93150-1|AAA36159.1| 711|Homo sapiens lactoferrin protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>M83205-1|AAA58656.1| 706|Homo sapiens HLF2 protein.
Length = 706
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 286 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 338
>M83202-1|AAA59511.1| 711|Homo sapiens lactoferrin protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>M73700-1|AAA59479.1| 710|Homo sapiens neutrophil lactoferrin
protein.
Length = 710
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 290 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 342
>DQ522304-1|ABF69105.1| 353|Homo sapiens lactoferrin protein.
Length = 353
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>BC022347-1|AAH22347.1| 711|Homo sapiens lactotransferrin protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>BC015823-1|AAH15823.1| 711|Homo sapiens lactotransferrin protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>BC015822-1|AAH15822.1| 711|Homo sapiens lactotransferrin protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>AY875691-1|AAW71443.1| 711|Homo sapiens lactoferrin protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>AY493417-1|AAS72878.1| 711|Homo sapiens growth-inhibiting protein
12 protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>AY178998-1|AAN75578.2| 711|Homo sapiens lactoferrin protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>AY165046-1|AAN63998.1| 711|Homo sapiens lactotransferrin precursor
protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>AY137470-1|AAN11304.1| 711|Homo sapiens lactoferrin protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>AF332168-1|AAG48753.1| 711|Homo sapiens lactoferrin precursor
protein.
Length = 711
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 411 LEKNPEKFGK-KSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKGWYSASG 566
L + EKFGK KSPK Q G P + + K S V P + G Y SG
Sbjct: 291 LRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSG 343
>DQ854807-1|ABI23973.1| 365|Homo sapiens visual system homeobox 1
transcript variant 1 protein.
Length = 365
Score = 31.9 bits (69), Expect = 4.2
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3
Query: 555 SASGGLXGPCVPWLLG 602
SA GGL G C PWLLG
Sbjct: 255 SAEGGLLGSCAPWLLG 270
>BC126228-1|AAI26229.1| 365|Homo sapiens visual system homeobox 1
protein.
Length = 365
Score = 31.9 bits (69), Expect = 4.2
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3
Query: 555 SASGGLXGPCVPWLLG 602
SA GGL G C PWLLG
Sbjct: 255 SAEGGLLGSCAPWLLG 270
>BC041560-1|AAH41560.1| 859|Homo sapiens ABCC4 protein protein.
Length = 859
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 426 EKFGKKSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKG 548
+K ++S + PG P R FS+ S W Q P+LK G
Sbjct: 632 KKDNEESEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDG 672
>AY207008-1|AAO37649.1| 1325|Homo sapiens ATP-binding cassette
transporter C4 protein.
Length = 1325
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 426 EKFGKKSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKG 548
+K ++S + PG P R FS+ S W Q P+LK G
Sbjct: 632 KKDNEESEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDG 672
>AY081219-1|AAL88745.1| 1325|Homo sapiens multidrug
resistance-associated protein protein.
Length = 1325
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 426 EKFGKKSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKG 548
+K ++S + PG P R FS+ S W Q P+LK G
Sbjct: 632 KKDNEESEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDG 672
>AL356257-1|CAI16722.1| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 426 EKFGKKSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKG 548
+K ++S + PG P R FS+ S W Q P+LK G
Sbjct: 632 KKDNEESEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDG 672
>AL157818-1|CAC36037.2| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 426 EKFGKKSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKG 548
+K ++S + PG P R FS+ S W Q P+LK G
Sbjct: 632 KKDNEESEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDG 672
>AL139381-1|CAI16589.1| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 426 EKFGKKSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKG 548
+K ++S + PG P R FS+ S W Q P+LK G
Sbjct: 632 KKDNEESEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDG 672
>AL080312-3|CAI18918.1| 365|Homo sapiens visual system homeobox 1
homolog, CHX10-like (zebrafish) protein.
Length = 365
Score = 31.9 bits (69), Expect = 4.2
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3
Query: 555 SASGGLXGPCVPWLLG 602
SA GGL G C PWLLG
Sbjct: 255 SAEGGLLGSCAPWLLG 270
>AF541977-1|AAN17334.1| 1278|Homo sapiens ATP-binding cassette
protein C4 splice variant A protein.
Length = 1278
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 426 EKFGKKSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKG 548
+K ++S + PG P R FS+ S W Q P+LK G
Sbjct: 632 KKDNEESEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDG 672
>AF251033-1|AAF99656.1| 365|Homo sapiens homeodomain protein RINX,
L1 isoform protein.
Length = 365
Score = 31.9 bits (69), Expect = 4.2
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3
Query: 555 SASGGLXGPCVPWLLG 602
SA GGL G C PWLLG
Sbjct: 255 SAEGGLLGSCAPWLLG 270
>AF176797-1|AAF37425.2| 365|Homo sapiens transcription factor VSX1
protein.
Length = 365
Score = 31.9 bits (69), Expect = 4.2
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3
Query: 555 SASGGLXGPCVPWLLG 602
SA GGL G C PWLLG
Sbjct: 255 SAEGGLLGSCAPWLLG 270
>AF071203-1|AAC27077.1| 893|Homo sapiens ABC transporter MOAT-B
isoform protein.
Length = 893
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 426 EKFGKKSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKG 548
+K ++S + PG P R FS+ S W Q P+LK G
Sbjct: 222 KKDNEESEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDG 262
>AF071202-1|AAC27076.1| 1325|Homo sapiens ABC transporter MOAT-B
protein.
Length = 1325
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 426 EKFGKKSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKG 548
+K ++S + PG P R FS+ S W Q P+LK G
Sbjct: 632 KKDNEESEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDG 672
>AB208973-1|BAD92210.1| 776|Homo sapiens ABCC4 protein variant
protein.
Length = 776
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 426 EKFGKKSPKAQKPGGPLPNRRVFSKXSXWWNQEVAPNLKKG 548
+K ++S + PG P R FS+ S W Q P+LK G
Sbjct: 549 KKDNEESEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDG 589
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,934,223
Number of Sequences: 237096
Number of extensions: 3210437
Number of successful extensions: 6251
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6251
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14815931368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -