Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C16
         (884 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P55438 Cluster: Uncharacterized protein y4eO; n=2; Rhiz...    34   4.2  
UniRef50_UPI000155630A Cluster: PREDICTED: similar to chromosome...    34   5.5  
UniRef50_Q6W132 Cluster: Copper resistance protein C; n=1; Rhizo...    28   6.1  
UniRef50_A0XBZ9 Cluster: Binding-protein-dependent transport sys...    33   7.3  
UniRef50_Q2XXS7 Cluster: CG12105; n=4; melanogaster subgroup|Rep...    33   7.3  
UniRef50_Q81Z79 Cluster: Membrane protein, putative; n=16; Bacte...    33   9.7  
UniRef50_Q3SKU6 Cluster: Cytochrome c, class I precursor; n=2; P...    33   9.7  

>UniRef50_P55438 Cluster: Uncharacterized protein y4eO; n=2;
           Rhizobiales|Rep: Uncharacterized protein y4eO -
           Rhizobium sp. (strain NGR234)
          Length = 221

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +1

Query: 49  YFESC*TLHENDRLSVVRTAGGGLGRATVLPW 144
           YFES   L   +RL  +R A G L RA  LPW
Sbjct: 61  YFESARRLTSEERLFAIRIAEGRLARARTLPW 92


>UniRef50_UPI000155630A Cluster: PREDICTED: similar to chromosome 14
           open reading frame 174; n=3; Amniota|Rep: PREDICTED:
           similar to chromosome 14 open reading frame 174 -
           Ornithorhynchus anatinus
          Length = 731

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +1

Query: 463 GCESRRPAGLRERRVEKS-PSR*XQKQPEDSKRAVAEPTETT-PTNVSREEMEFTTESXV 636
           GCE   P G+    +EK+ P    Q+ PE ++  + + TET  P    +E  E T     
Sbjct: 105 GCEQEAPEGIEPELIEKAEPQEREQEAPEGTEPELTKETETEGPQGRRQESPEGTEPELT 164

Query: 637 RDVD 648
           ++ D
Sbjct: 165 KEAD 168


>UniRef50_Q6W132 Cluster: Copper resistance protein C; n=1;
           Rhizobium sp. NGR234|Rep: Copper resistance protein C -
           Rhizobium sp. (strain NGR234)
          Length = 535

 Score = 28.3 bits (60), Expect(2) = 6.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 59  VVERSTRMIALVLCGLLAAVSAA 127
           +V R  R++ + LCGLLA V+ A
Sbjct: 7   IVSRLARLLVIALCGLLAQVAVA 29



 Score = 24.2 bits (50), Expect(2) = 6.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 110 AAVSAAPQYYHGSFTLAVSPL 172
           A V AAP +Y  +F+  VSPL
Sbjct: 44  AVVDAAPSFYALTFSEPVSPL 64


>UniRef50_A0XBZ9 Cluster: Binding-protein-dependent transport
           systems inner membrane component precursor; n=1;
           Dinoroseobacter shibae DFL 12|Rep:
           Binding-protein-dependent transport systems inner
           membrane component precursor - Dinoroseobacter shibae
           DFL 12
          Length = 272

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -2

Query: 586 GSSQWALQLPSCYPLAAFGFSGKVIFQHVFLVNQLAFGI 470
           G+SQ+ +    C PLA  G +   IF  +F  N+L FG+
Sbjct: 174 GASQFTIMRKICLPLAMPGVAVSAIFSFIFSWNELMFGL 212


>UniRef50_Q2XXS7 Cluster: CG12105; n=4; melanogaster subgroup|Rep:
           CG12105 - Drosophila yakuba (Fruit fly)
          Length = 1426

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
 Frame = +1

Query: 469 ESRRPAGLRERRVEKSPSR*XQKQPEDSKRAVAEPTETTPTNVSREEMEFTTESXVRDVD 648
           +  R    +E +V++  +   ++  EDS        E  P N S +EM+F  +   +D+D
Sbjct: 625 KGNREEQAKETKVQREQTPFARELLEDSVEREVRANEKQPLNAS-QEMKFNEKDMSKDID 683

Query: 649 VGLETAQKTMKSR--SCXSDHVRCHIRDD 729
           V  +   K +K++      DH     + D
Sbjct: 684 VSKKEVTKELKNQDGKIPQDHDNVDFKQD 712


>UniRef50_Q81Z79 Cluster: Membrane protein, putative; n=16;
           Bacteria|Rep: Membrane protein, putative - Bacillus
           anthracis
          Length = 427

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = -2

Query: 583 SSQWALQLPSCYPLAAFGFSGKVIFQHVFLVN 488
           +SQW L L  CY LA  GF+G  IF   FLV+
Sbjct: 103 TSQWYLLL-GCYMLALVGFAGANIFYDAFLVD 133


>UniRef50_Q3SKU6 Cluster: Cytochrome c, class I precursor; n=2;
           Proteobacteria|Rep: Cytochrome c, class I precursor -
           Thiobacillus denitrificans (strain ATCC 25259)
          Length = 657

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 22  YRESFKI*VYFESC*TLHENDRLSVVRTAGGGLGRAT--VLPWLVHIGRITITTPFSPYV 195
           YRE+F+  +++++     E  R SV+  AG GLG AT  VL W++   R  +  P  P+ 
Sbjct: 520 YREAFETVLFYQALWQQAEGARSSVL--AGAGLGAATLAVLGWMIF--RFGLRLPIGPFF 575

Query: 196 RXS 204
             S
Sbjct: 576 AAS 578


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,202,440
Number of Sequences: 1657284
Number of extensions: 14953328
Number of successful extensions: 39841
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 38337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39806
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)