Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C16
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   1.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   4.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   4.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.6  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 86  ALVLCGLLAAVSAAPQYYHGSF 151
           A++LC  L AVSAA   Y   +
Sbjct: 6   AVILCAFLVAVSAAENKYTNKY 27


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 108 WRRSRPRHSTTMARSHWPYHHYDPLQSLRSGX-HVGHTFALVQPCQRN 248
           W+R     ++++  +HW     DP Q L  G    GH F LV   Q +
Sbjct: 226 WQRDNLNANSSI--THWILSGADP-QKLAIGIAFYGHAFTLVDASQHD 270


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 508 QHVFLVNQLAFGIHIPGXG 452
           ++V ++N + +  HIPG G
Sbjct: 194 ENVDVINLMTYDFHIPGGG 212



 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +3

Query: 108 WRRSRPRHSTTMARSHWPYHHYDPLQSLRSGXHVGHTFALVQPCQRN 248
           W+R     ++T+   +W     DP +        GHTF L  P Q +
Sbjct: 229 WQREYENVNSTVV--NWVNAGADPGKLTIGLAFYGHTFQLADPAQHD 273


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 508 EKSPSR*XQKQPEDSKRAVAEPTETTPTNVSREEMEFTTESXVRD 642
           E  P++   +QP +S       T  TP + +  +   T E  VRD
Sbjct: 408 ESEPTQ-ASEQPTESSTTQKPQTTKTPESGNESDGVCTKEGIVRD 451


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,856
Number of Sequences: 336
Number of extensions: 3689
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)