Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C16
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166...    32   0.70 
01_06_1606 + 38587709-38588002                                         29   3.8  
11_03_0018 - 8996642-8996776,8997255-8997497                           29   5.0  
09_02_0414 - 8825575-8826654,8826737-8827144                           29   6.6  
08_02_1129 - 24513568-24514296,24515380-24515817                       29   6.6  
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468...    28   8.7  
06_03_1103 - 27615875-27616192                                         28   8.7  
04_03_0116 - 11448012-11448525,11448693-11448763,11449139-114494...    28   8.7  

>02_05_0110 +
           25914110-25915006,25915726-25915797,25916411-25916699,
           25916864-25916949,25917267-25917490,25917674-25917740,
           25917830-25917889,25917995-25918078,25918475-25918555
          Length = 619

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +1

Query: 442 KIQNLXLGCESRRPAGLRERRVEKSPSR*XQKQPEDSKRAVAEPTETTPTNVSREEME 615
           ++  L L  + +RP      +   SP    Q+QPE   R V    E  P  V+ EE E
Sbjct: 185 QVLGLMLNIKIQRPEASESSQPSSSPPSQPQEQPEAKAREVEPEPEPEPMEVTDEEKE 242


>01_06_1606 + 38587709-38588002
          Length = 97

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
 Frame = +1

Query: 454 LXLGCESRRPAGLRE--RRVEKSPSR*XQKQPEDSKRAVAE-----PTETTPTNVSREEM 612
           + +   S+R   L +  +R+E++ +R  + QP  SKR V E     PT   PT  S  E 
Sbjct: 1   MEIAMSSKRAEELEQLIQRMEQAAARRRKTQPAGSKRKVPEPDTFCPTRWLPTPESLRES 60

Query: 613 EFTTESXVRDVDVGLETAQKTMKS 684
           E   ++ +R     +  A + ++S
Sbjct: 61  EEKHQAFMRGAREVIREADEALES 84


>11_03_0018 - 8996642-8996776,8997255-8997497
          Length = 125

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/74 (25%), Positives = 37/74 (50%)
 Frame = +1

Query: 217 HSLWSNLANEMQHLDDMMKELSLKFPAL*NEGRVEGDKYQISIHPAWLRTERHQRESEKL 396
           +S +S + N MQ   +++KEL     +L N+ +   DK++  IH  + + E H++     
Sbjct: 18  NSSFSGIDNIMQP-SEILKELEFNGESLPNQVKEAIDKHKDKIHYTYYKWEIHEKTQGNA 76

Query: 397 EC*WLQANSALIIT 438
           E  +    + L I+
Sbjct: 77  EANYTNMEALLKIS 90


>09_02_0414 - 8825575-8826654,8826737-8827144
          Length = 495

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +1

Query: 226 WSNLANEMQHLDDMMKELSLKFPAL*NEGRVEGDK----YQISIHPAWLRTERHQ 378
           W  + N++ H +D    +  K+P+  +EG  + DK    Y    H  +L   +H+
Sbjct: 176 WQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHK 230


>08_02_1129 - 24513568-24514296,24515380-24515817
          Length = 388

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -2

Query: 670 SGLSPSRRQRPARCSRW*TPSLHDLHX*GSSQWALQLPSC 551
           S +SP   QR A CSRW  PS   L    +   A+QL  C
Sbjct: 260 SAVSPPAEQRAACCSRWWVPSSLSLVASLALAAAVQLRVC 299


>07_03_1258 +
           25244863-25245282,25246419-25246568,25246665-25246877,
           25246979-25247068,25247311-25247424,25247881-25248150,
           25248251-25248407,25248691-25248741,25248742-25248819,
           25249357-25249457,25249832-25250002,25250136-25250210,
           25251527-25251793
          Length = 718

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 518 GDFSTRLSRKPAGLRDSHPRXRFCIF 441
           GD S  +  +P+ LRD   R RFCIF
Sbjct: 295 GDLSGGVLVQPSTLRDYDDRDRFCIF 320


>06_03_1103 - 27615875-27616192
          Length = 105

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 86  ALVLCGLLAAVSAAPQYYHGSF 151
           AL+LCG LA+V +    +HG+F
Sbjct: 45  ALMLCGALASVGSISHNHHGAF 66


>04_03_0116 -
           11448012-11448525,11448693-11448763,11449139-11449421,
           11449520-11449672,11449750-11450219,11451470-11451631,
           11451718-11451987,11452229-11452633
          Length = 775

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +2

Query: 470 NPEGQLVYEKDVLKNHLPAEXKSSQRIARGQLQSPLRRPL 589
           NPE Q+VY+K + K H  ++ + + RI + QL+  L+  L
Sbjct: 125 NPEDQVVYQK-IYKKHKLSKAQKAARI-KAQLREELKEEL 162


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,624,424
Number of Sequences: 37544
Number of extensions: 427013
Number of successful extensions: 1127
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)