Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C16
         (884 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003647-1|AAH03647.2|  169|Homo sapiens PXN protein protein.          35   0.34 
AL138742-2|CAO03537.1| 1403|Homo sapiens KIAA1009 protein.             30   9.7  
AL138742-1|CAI22698.2| 1327|Homo sapiens KIAA1009 protein.             30   9.7  
AB023226-1|BAA76853.2| 1345|Homo sapiens KIAA1009 protein protein.     30   9.7  

>BC003647-1|AAH03647.2|  169|Homo sapiens PXN protein protein.
          Length = 169

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 19/56 (33%), Positives = 23/56 (41%)
 Frame = +3

Query: 96  CADCWRRSRPRHSTTMARSHWPYHHYDPLQSLRSGXHVGHTFALVQPCQRNATLGR 263
           C+ C +    R  T MA+   P     P   L S  H  H F + Q C R A  GR
Sbjct: 99  CSGCQKPITGRCITAMAKKFHPSPCTSPRTGLASTPHWSHLFLIFQQCSRGAGKGR 154


>AL138742-2|CAO03537.1| 1403|Homo sapiens KIAA1009 protein.
          Length = 1403

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 235  LANEMQHLDDMMKELSLKFPAL*N--EGRVEGDKYQISIHPAWLRTERHQRESEKLEC 402
            L NE++ L     EL +K  A+ N  E  +   K   + H A L+   HQRE EKL C
Sbjct: 1179 LKNELEGLISEKNELKMKSEAVMNQFENSMRRVKEDTAAHIASLKAS-HQREIEKLLC 1235


>AL138742-1|CAI22698.2| 1327|Homo sapiens KIAA1009 protein.
          Length = 1327

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 235  LANEMQHLDDMMKELSLKFPAL*N--EGRVEGDKYQISIHPAWLRTERHQRESEKLEC 402
            L NE++ L     EL +K  A+ N  E  +   K   + H A L+   HQRE EKL C
Sbjct: 1103 LKNELEGLISEKNELKMKSEAVMNQFENSMRRVKEDTAAHIASLKAS-HQREIEKLLC 1159


>AB023226-1|BAA76853.2| 1345|Homo sapiens KIAA1009 protein protein.
          Length = 1345

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 235  LANEMQHLDDMMKELSLKFPAL*N--EGRVEGDKYQISIHPAWLRTERHQRESEKLEC 402
            L NE++ L     EL +K  A+ N  E  +   K   + H A L+   HQRE EKL C
Sbjct: 1121 LKNELEGLISEKNELKMKSEAVMNQFENSMRRVKEDTAAHIASLKAS-HQREIEKLLC 1177


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,021,739
Number of Sequences: 237096
Number of extensions: 2385759
Number of successful extensions: 9142
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9136
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)