Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C15
         (928 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0204 - 19022329-19023990                                         30   3.0  
06_03_0613 + 22748223-22749513,22750046-22750179,22751066-227513...    29   4.0  
02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200,145...    29   4.0  
12_01_0668 - 5682664-5682916,5684542-5684576,5684643-5684693,568...    28   9.2  
12_01_0151 - 1158834-1159703,1159917-1160092,1160144-1162097,116...    28   9.2  

>05_04_0204 - 19022329-19023990
          Length = 553

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 348 IEKSCDKYMNVDVVKQFMEMYKMGMLPRGETF 443
           + K CD++  + VVK F +M K G+ P   TF
Sbjct: 355 MRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTF 386


>06_03_0613 +
           22748223-22749513,22750046-22750179,22751066-22751309,
           22751401-22751609,22751691-22751740,22751933-22752053,
           22752138-22752383
          Length = 764

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = -1

Query: 493 TRKTLTASSIWSSLVWTKVSPRGSMPILYISMNCLTTSTFMYLSQLFSMLYSLAIS 326
           +R TL +  +W  L   K+    ++ +L ++ NCL  +   + S+++S L SL +S
Sbjct: 118 SRLTLASLGVWGELPGAKLHRLQALRVLNLTGNCLYGAVPEHFSRMYS-LQSLVLS 172


>02_01_0223 +
           1453478-1453750,1455788-1456018,1456066-1456200,
           1457918-1457971,1458417-1458482,1458593-1458679,
           1459338-1459394,1459470-1459500,1459577-1459634,
           1459710-1459761,1459881-1459917,1460008-1460210,
           1460556-1460633,1460683-1460853,1461126-1461239
          Length = 548

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 704 HLHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARG 588
           H HH G   D A   EV  D V +      A G+V+ RG
Sbjct: 24  HHHHDGAAGDSAAAAEVPQDKVVAAAAAAAAAGNVQRRG 62


>12_01_0668 -
           5682664-5682916,5684542-5684576,5684643-5684693,
           5685362-5685505,5685981-5686265,5686369-5686441,
           5687123-5687343,5687447-5687524,5687626-5687688,
           5688700-5688900
          Length = 467

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 21/57 (36%), Positives = 31/57 (54%)
 Frame = -3

Query: 749 CRSIFQRXRVLGGFSHLHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKS 579
           CRSI +R  +L G +H  H     ++  N  +  DL+  G VET+ +G  EAR  +S
Sbjct: 276 CRSIAERGVMLIGTAHGEHLA---NIIKNPTLS-DLI--GGVETVTLGDEEARARRS 326


>12_01_0151 -
           1158834-1159703,1159917-1160092,1160144-1162097,
           1162360-1162620,1162729-1162916,1164127-1164166
          Length = 1162

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -2

Query: 270 AKLPSF--FMFKGFTNLVSLWVXDP 202
           A+LPS   F+ KG  NLV LW   P
Sbjct: 847 ARLPSLNTFVLKGMPNLVELWTSSP 871


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,705,342
Number of Sequences: 37544
Number of extensions: 407520
Number of successful extensions: 961
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)