Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C11
         (1016 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          36   0.001
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          36   0.001
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          36   0.001
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           36   0.001

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 43/109 (39%), Positives = 52/109 (47%)
 Frame = +3

Query: 666 PMLRSPIQAGALACYAFXFVTTGYRAGTPGNGXLQHRXPSTXGXAXPPXXSWVXEFGPVX 845
           P +   IQA  L+ YA    TTG    + G+G + H  P   G A P     +   G   
Sbjct: 131 PAMYVAIQA-VLSLYASGR-TTGIVLDS-GDG-VSHTVPIYEGYALPHAILRLDLAG--R 184

Query: 846 DLTDYLMKILTERGXLVHYHRRAGXSVRDIXXEAVXTFALEFRXRRMAT 992
           DLTDYLMKILTERG            VRDI  E +   AL+F  + MAT
Sbjct: 185 DLTDYLMKILTERGYSFTTTAER-EIVRDI-KEKLCYVALDFE-QEMAT 230


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 43/109 (39%), Positives = 52/109 (47%)
 Frame = +3

Query: 666 PMLRSPIQAGALACYAFXFVTTGYRAGTPGNGXLQHRXPSTXGXAXPPXXSWVXEFGPVX 845
           P +   IQA  L+ YA    TTG    + G+G + H  P   G A P     +   G   
Sbjct: 131 PAMYVAIQA-VLSLYASGR-TTGIVLDS-GDG-VSHTVPIYEGYALPHAILRLDLAG--R 184

Query: 846 DLTDYLMKILTERGXLVHYHRRAGXSVRDIXXEAVXTFALEFRXRRMAT 992
           DLTDYLMKILTERG            VRDI  E +   AL+F  + MAT
Sbjct: 185 DLTDYLMKILTERGYSFTTTAER-EIVRDI-KEKLCYVALDFE-QEMAT 230


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 43/109 (39%), Positives = 52/109 (47%)
 Frame = +3

Query: 666 PMLRSPIQAGALACYAFXFVTTGYRAGTPGNGXLQHRXPSTXGXAXPPXXSWVXEFGPVX 845
           P +   IQA  L+ YA    TTG    + G+G + H  P   G A P     +   G   
Sbjct: 131 PAMYVAIQA-VLSLYASGR-TTGIVLDS-GDG-VSHTVPIYEGYALPHAILRLDLAG--R 184

Query: 846 DLTDYLMKILTERGXLVHYHRRAGXSVRDIXXEAVXTFALEFRXRRMAT 992
           DLTDYLMKILTERG            VRDI  E +   AL+F  + MAT
Sbjct: 185 DLTDYLMKILTERGYSFTTTAER-EIVRDI-KEKLCYVALDFE-QEMAT 230


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 33/76 (43%), Positives = 39/76 (51%)
 Frame = +3

Query: 660 APPMLRSPIQAGALACYAFXFVTTGYRAGTPGNGXLQHRXPSTXGXAXPPXXSWVXEFGP 839
           A P +   IQA  L+ YA    TTG    + G+G + H  P   G A P     +   G 
Sbjct: 129 AAPAVYVAIQA-VLSLYASGR-TTGVVLDS-GDG-VSHTVPIYEGYALPHAILRMDLAG- 183

Query: 840 VXDLTDYLMKILTERG 887
             DLTDYLMKILTERG
Sbjct: 184 -RDLTDYLMKILTERG 198



 Score = 25.8 bits (54), Expect = 2.1
 Identities = 19/40 (47%), Positives = 21/40 (52%)
 Frame = +1

Query: 886  GYSFTTTXEREXPFVTSXXKLCXRSLSNFEXGEWPPVASS 1005
            GYSFTTT ERE        KLC  +L +FE       ASS
Sbjct: 198  GYSFTTTAEREI-VRDIKEKLCYVAL-DFEQEMQAAAASS 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 950,566
Number of Sequences: 2352
Number of extensions: 17876
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 112230027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)