Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C10
         (896 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         30   0.083
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   4.1  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 30.3 bits (65), Expect = 0.083
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 738 VARAVHEXXXIPXXLVPSHXCTXVPXGXIEHGKPPYQIL 854
           V RA HE       +  SH C  +P G  E   P Y++L
Sbjct: 103 VGRAYHEGSQTIGKVQCSHNCIYIPYGGAEVSVPTYEVL 141


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 698 AXGGTGPXEXSTHIPALPDXGG 633
           A GG GP      +PALP  GG
Sbjct: 414 ASGGVGPCFGEPPLPALPLPGG 435


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,060
Number of Sequences: 2352
Number of extensions: 5364
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)