Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C09
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225           31   1.7  
09_04_0457 - 17736158-17737336                                         30   2.3  
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152...    30   2.3  
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568...    29   5.2  
01_01_0401 + 3043634-3043894,3045610-3045849                           28   9.1  

>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
          Length = 467

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 731 GGEGXGGXFFXXKXKPPPPP 790
           GG G GG F     KPPPPP
Sbjct: 21  GGGGGGGGFSPTAAKPPPPP 40


>09_04_0457 - 17736158-17737336
          Length = 392

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 80  SNEKFIVLLFVVAAVGYVTGHISNEKMPKGEHSVLYCPQMA 202
           SN + ++LL ++A  G+     S +  P G ++  + P MA
Sbjct: 8   SNGRLLMLLLLLAVAGFAAAQPSQDNPPAGYYATNFSPSMA 48


>02_05_0962 +
           33114226-33114684,33114806-33114853,33115166-33115286,
           33115760-33116008,33116149-33116302,33116493-33116985,
           33117524-33117596,33118285-33118343
          Length = 551

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 731 GGEGXGGXFFXXKXKPPPPP 790
           GG G GG F   +  PPPPP
Sbjct: 53  GGGGGGGGFLRLRSAPPPPP 72


>01_06_1801 -
           39954425-39954533,39955289-39955578,39955786-39956838,
           39956998-39957263,39957345-39957420,39957525-39957605,
           39957676-39957831,39958565-39958669,39958761-39959367,
           39959514-39959585,39959802-39959953,39960063-39960240,
           39960642-39960745,39960822-39960953,39961036-39961132,
           39961280-39961407,39961533-39961592,39962799-39962918,
           39963011-39963091,39963173-39963361,39963826-39964024,
           39964177-39964257,39964398-39964588,39965226-39965382,
           39965986-39966119,39966266-39966334,39966434-39966481,
           39966572-39966646,39967112-39967192,39967399-39967461,
           39967564-39967623,39967754-39967795,39968777-39968902,
           39969027-39969176
          Length = 1843

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 324 PYTFASFRVPDIRPVAEALWYVAWAHVVNEI 232
           P   A+FRVPD  P+A  L+ + WA V  ++
Sbjct: 25  PAAAAAFRVPDPVPMARFLYELCWAVVRGDL 55


>01_01_0401 + 3043634-3043894,3045610-3045849
          Length = 166

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 804 PXXPXGGGGGXFLXXKKXPPXPSPP 730
           P  P GGGGG      + PP PSPP
Sbjct: 16  PLLPPGGGGGGGKKLHQSPP-PSPP 39


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,965,749
Number of Sequences: 37544
Number of extensions: 375412
Number of successful extensions: 1380
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)