Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C09
         (921 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    25   2.4  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    25   2.4  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   4.3  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    24   5.6  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    24   7.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   7.5  

>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 271 CFCDRPNVRNTKTGKCV 321
           CFC    VR +K GKC+
Sbjct: 70  CFCKPGFVRESKEGKCI 86


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 175 MFTFRHFLVGNVPGDVTDS 119
           M +++H+LVGN+PG   D+
Sbjct: 105 MRSWKHWLVGNIPGADVDA 123


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 262 VPQCFCDRPNVRNTKTGKCV 321
           +P C C +  VR T+ G CV
Sbjct: 55  LPGCVCKKGFVRETQFGNCV 74



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 271 CFCDRPNVRNTKTGKCV 321
           C C +  VR T+ GKC+
Sbjct: 95  CVCKKGFVRKTEFGKCI 111


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 262 VPQCFCDRPNVRNTKTGKCVRESEC 336
           V  CFC +  VR    G C+   +C
Sbjct: 69  VAGCFCKKNYVRRAIGGSCIWAKKC 93


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 271 CFCDRPNVRNTKTGKCVRESEC 336
           CFC    +R++  G C+  + C
Sbjct: 172 CFCKPSYIRSSDGGPCIPTNNC 193


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 35   FKNLIISSCIVKENVSNEKFIVL 103
            FKN+ I +  +KE   N +FI++
Sbjct: 1223 FKNVSIVAHYIKERTKNAQFIII 1245


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,327
Number of Sequences: 2352
Number of extensions: 12342
Number of successful extensions: 89
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)