Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C09
         (921 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    30   2.7  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   4.7  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   4.7  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   4.7  
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr...    29   6.2  
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p...    29   6.2  

>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 256 CDVPQCFCDRPNVRNTKTGKCVRESEC 336
           C    C C +  VR++ TGKCV +++C
Sbjct: 105 CMTNVCQCKKGLVRDSATGKCVEKNKC 131


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/43 (32%), Positives = 14/43 (32%)
 Frame = +2

Query: 776 PPPPPXGXXGFXFXGXXXPXSPXXXXPXXPXXXGXGXXGXPXP 904
           PPPPP G           P  P    P  P     G  G P P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/43 (32%), Positives = 14/43 (32%)
 Frame = +2

Query: 776 PPPPPXGXXGFXFXGXXXPXSPXXXXPXXPXXXGXGXXGXPXP 904
           PPPPP G           P  P    P  P     G  G P P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/43 (32%), Positives = 14/43 (32%)
 Frame = +2

Query: 776 PPPPPXGXXGFXFXGXXXPXSPXXXXPXXPXXXGXGXXGXPXP 904
           PPPPP G           P  P    P  P     G  G P P
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369


>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 125 GYVTGHIS-NEKMPKGEHSVLYCPQMAEPDCENPEVTISLTTWAHATYHSASATGLMSG 298
           GY + H+S   K P G H     P  ++ D  +PE T+ L +   +   +   T + SG
Sbjct: 484 GYCSRHLSLKSKPPHGHHMERGSPGSSKSDIFHPEPTVFLPSSTASRVPTTVNTAVFSG 542


>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 125 GYVTGHIS-NEKMPKGEHSVLYCPQMAEPDCENPEVTISLTTWAHATYHSASATGLMSG 298
           GY + H+S   K P G H     P  ++ D  +PE T+ L +   +   +   T + SG
Sbjct: 484 GYCSRHLSLKSKPPHGHHMERGSPGSSKSDIFHPEPTVFLPSSTASRVPTTVNTAVFSG 542


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,720,777
Number of Sequences: 27780
Number of extensions: 288649
Number of successful extensions: 1056
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)