Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_C07
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 37 0.018
03_06_0471 + 34169562-34169892,34170121-34170347 33 0.39
02_04_0382 - 22501041-22501279,22501717-22501810 32 0.51
07_03_0263 - 15951011-15951818,15952009-15952526,15952949-159531... 31 1.2
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 31 1.2
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 3.6
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 29 3.6
01_01_0082 + 625198-625719 29 6.3
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 221 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDPPQGRPYFKPTPFPG 391
QP Y P + P V PP Y P +G P N + Y +PP GRP P P G
Sbjct: 387 QPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYG 445
Query: 392 ARG 400
A G
Sbjct: 446 AGG 448
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 242 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 391
Y P P PP Y P+ GY P GAY PP G +P + P +PG
Sbjct: 56 YPPAGGYPGAQYPPSGYPPSQGGYPP---GAY---PPSGYPQQPGYPPAGYPG 102
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 218 AQPTVGNGYEPIDNRPYIVNPPK----DYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPF 385
A+ T +G P ++ + PP D P+ + Y+P + YY DPP Y+ P P
Sbjct: 28 AEQTHDDGDNPPESPDHEDPPPSPEYYDPPPSPDYYDPPHSPDYY-DPPPSPDYYDPPPS 86
Query: 386 PGARGG 403
P GG
Sbjct: 87 PYYGGG 92
>07_03_0263 -
15951011-15951818,15952009-15952526,15952949-15953197,
15953270-15953857
Length = 720
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 173 STTLXWGLSVGQSQ-QSEDEKHEELH-FEXSTSEHRAKSMKXXR 48
STTL G GQ Q Q E+E+ EE STS R+KS K R
Sbjct: 304 STTLVPGDDYGQDQGQEEEEEDEEFQPTPSSTSSQRSKSQKGKR 347
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 31.1 bits (67), Expect = 1.2
Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 1/122 (0%)
Frame = +2
Query: 14 SASPLGPPFXLCAXLSYFSPCAHSCSSQNAILHAFRPRSAGSGQRSSPXLRXWKTLTQLX 193
SA P PP L + + A+ +S + P+ G P ++ Q
Sbjct: 201 SAYPHPPPSLLARDVEH---AAYPPTSTTYPPQPYPPQPQGQTYPPQPQGETYQPQPQRE 257
Query: 194 SMXPNPFFAQPTVGNGYEPI-DNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYF 370
+ P P QP Y P +PY PP+ P G Y P G Y PP+G+P +
Sbjct: 258 TYPPQPQ-VQP-----YPPKPQGQPY---PPQ---PQGQPYPPQPYGQTYPPPPKGQPTY 305
Query: 371 KP 376
P
Sbjct: 306 PP 307
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 248 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 388
P + P IV P Y P+ YEP Y +PP PY P FP
Sbjct: 636 PYPSPPDIVPSPPSYEPSPPSYEP-SPPEYAPEPPVYAPY-PPGIFP 680
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +2
Query: 224 PTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPG 391
P++ NG P+ + PP P+ NGA PP G P P PG
Sbjct: 638 PSMANGAGPVPPPIAVAPPPAPPIAGAAPPPPMANGAAAAAPPGGNPAPPAGPQPG 693
>01_01_0082 + 625198-625719
Length = 173
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 224 PTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPF-PGARG 400
P G GY P + NP YNP +G+ N Y+ PP G Y + F P A
Sbjct: 97 PYGGGGYNPTPS----YNPTPGYNPTPSGWFTPPNMPSYLTPP-GTLYPQDPGFRPNAAA 151
Query: 401 G 403
G
Sbjct: 152 G 152
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,687,798
Number of Sequences: 37544
Number of extensions: 334497
Number of successful extensions: 735
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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