Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C07
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    31   0.79 
Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical p...    29   3.2  
AF099927-3|AAZ32795.1|  893|Caenorhabditis elegans Hypothetical ...    28   7.4  
AF099927-1|AAZ32794.1|  955|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z77657-9|CAB01149.2|  381|Caenorhabditis elegans Hypothetical pr...    28   9.8  
U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
 Frame = +2

Query: 203 PNPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDPPQGRPYFK 373
           PN   +QPT +G G  P    P  V PP  Y   P  +G    DNGA     P G PY  
Sbjct: 346 PNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYPS 402

Query: 374 PTPFPGARG 400
             P P   G
Sbjct: 403 DVPAPYPSG 411


>Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 221 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 319
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical
           protein M04G12.4b protein.
          Length = 550

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 221 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 319
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 62  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 90


>Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 221 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 319
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>AF099927-3|AAZ32795.1|  893|Caenorhabditis elegans Hypothetical
           protein T04C4.1b protein.
          Length = 893

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -2

Query: 206 SGXLXTTESAFSTTLXWGLSVGQSQQSEDEKHEELHFEXSTSEH 75
           S  + TT  AFS      ++ G+ Q   D  H   HF   +S H
Sbjct: 242 SRSIMTTPEAFSRVRHISITFGEQQHDIDTDHSNQHFGSPSSLH 285


>AF099927-1|AAZ32794.1|  955|Caenorhabditis elegans Hypothetical
           protein T04C4.1a protein.
          Length = 955

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -2

Query: 206 SGXLXTTESAFSTTLXWGLSVGQSQQSEDEKHEELHFEXSTSEH 75
           S  + TT  AFS      ++ G+ Q   D  H   HF   +S H
Sbjct: 303 SRSIMTTPEAFSRVRHISITFGEQQHDIDTDHSNQHFGSPSSLH 346


>Z77657-9|CAB01149.2|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.5 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
 Frame = +2

Query: 89  SSQNAILHAFRPRSAGSGQRSSPXLRXWKTLTQ---LXSMXPNPFFAQPTVGNGYEPIDN 259
           SS NA+   F   S  + +     L  W   T+   +     N  F  P   N Y+P   
Sbjct: 240 SSSNAVSFIFHTDSIVTDKG---WLLTWSAKTKTPPISQSGQNGSFTSPNYPNNYDPYTE 296

Query: 260 RPYIVNPPKDYNPN 301
           + Y VN P  +  N
Sbjct: 297 QIYYVNAPTGFQVN 310


>U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical
           protein F10G7.6 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 245 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 331
           EP D  P + V PP  + PN NG  P  NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,591,180
Number of Sequences: 27780
Number of extensions: 260670
Number of successful extensions: 647
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)