Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C05
         (999 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.7  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   6.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -3

Query: 355 PXXGGQKKGGXSXXGGGXGFXKTKXFLXGXKIKXGPXXYGGG 230
           P  GG   GG    GGG G  + +      + + G    GGG
Sbjct: 212 PGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253



 Score = 23.8 bits (49), Expect = 8.2
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 356 PXXXGPKKGGXXPXGGGGG 300
           P    P  GG    GGGGG
Sbjct: 154 PNAQNPSSGGRSSSGGGGG 172



 Score = 23.8 bits (49), Expect = 8.2
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
 Frame = -2

Query: 956 GGGXGAG-PXXRXCFFXGXGXGRGGXGAG 873
           GGG G G P        G G G GG G G
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
 Frame = +3

Query: 873 AXPPPPPSXPXPXKKT-XXXGGXRXXPPP 956
           A PPPPP  P P        GG     PP
Sbjct: 584 APPPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 6.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 929 GXXPXXPPPPXXPXTXSPAG 988
           G     PPPP  P + SP G
Sbjct: 779 GIGSPPPPPPPPPSSLSPGG 798


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,751
Number of Sequences: 2352
Number of extensions: 8300
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 109763433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)