Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_C05
(999 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.73
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.73
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 32 0.73
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.73
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.73
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.2
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 2.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 3.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 5.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.8
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 6.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 879 PPPPPSXPXPXKKTXXXGGXRXXPPPP 959
PPPPP P GG + PPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 300 PXPPPXXXXPPFFWPPXXGGXKGG 371
P PPP PP PP GG KGG
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 879 PPPPPSXPXPXKKTXXXGGXRXXPPPP 959
PPPPP P GG + PPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 300 PXPPPXXXXPPFFWPPXXGGXKGG 371
P PPP PP PP GG KGG
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGG 783
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 874 PAPXPPLPXPXPXKKQXRXXGPAPXPPP 957
PAP P P P P ++ + PAP P P
Sbjct: 128 PAPAPETPAPAPVQETPQVVAPAPEPTP 155
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 879 PPPPPSXPXPXKKTXXXGGXRXXPPPP 959
PPPPP P GG + PPPP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 300 PXPPPXXXXPPFFWPPXXGGXKGG 371
P PPP PP PP GG KGG
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGG 366
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 874 PAPXPPLPXPXPXKKQXRXXGPAPXPPP 957
P+P PP P P P P P PPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 874 PAPXPPLPXPXPXKKQXRXXGPAPXPPP 957
P P PP P P K P P PPP
Sbjct: 1354 PVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -2
Query: 995 PPPXPGKXXMVXXGGGXGAGPXXRXCFFXGXGXGRGGXGAG 873
PPP P GGG G G C G G G GG G G
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGC-GGGGGCGGGGGGCG 93
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 956 GGGXGAGPXXRXCFFXGXGXGRGGXGAG 873
GGG G G C G G G GG G G
Sbjct: 144 GGGGGCGGGGGGCGGGGGGCGGGGGGCG 171
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 880 PXPPLPXPXPXKKQXRXXG---PAPXPPPXXTXHXFPGXGG 993
P PP P P P K+Q R P P PPP + P G
Sbjct: 509 PTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAG 549
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 873 AXPPPPPSXPXPXKKTXXXGGXRXXPPPPXXHXXFPRXGGG 995
A PPPPP P PPPP P G G
Sbjct: 607 AVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAG 647
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 873 AXPPPPPSXPXPXKKTXXXGGXRXXPPPP 959
A PPPPP P G PPPP
Sbjct: 628 AAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 873 AXPPPPPSXPXPXKKTXXXGGXRXXPPPPXXHXXFPRXGGG 995
A PPPPP P PPPP P G G
Sbjct: 433 AVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAG 473
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 873 AXPPPPPSXPXPXKKTXXXGGXRXXPPPP 959
A PPPPP P G PPPP
Sbjct: 454 AAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 879 PPPPPSXPXPXKKTXXXGGXRXXPPPPXXHXXFPRXGG 992
PPPPP P P + G PPPP P GG
Sbjct: 297 PPPPP--PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 332
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 886 PPLPXPXPXKKQXRXXGPAPXPPPXXTXHXFPGXGG 993
PP P P P + P PPP + PG GG
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 332
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 879 PPPPPSXPXPXKKTXXXGGXRXXPPPPXXHXXFPRXGG 992
PPPPP P P + G PPPP P GG
Sbjct: 307 PPPPP--PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 342
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 886 PPLPXPXPXKKQXRXXGPAPXPPPXXTXHXFPGXGG 993
PP P P P + P PPP + PG GG
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 342
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 879 PPPPPSXPXPXKKTXXXGGXRXXPPPP 959
PPPPP P P + T R PPP
Sbjct: 548 PPPPPREPTPREPTPEPEPVREPTPPP 574
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 911 KKNNXGGXXPXXPPPPXXPXTXSP 982
+K+ GG P PPPP P T P
Sbjct: 129 RKSRAGGSSPPPPPPPRVPRTPPP 152
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 862 TXXXPAPXPPLPXPXPXKKQ-XRXXGPAPXPPP 957
T P P PP P P P +Q + AP PPP
Sbjct: 22 TTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPP 54
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 956 GGGXGAGPXXRXCFFXGXGXGRGGXGAG 873
GGG G G C G G G GG G G
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCG 125
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 956 GGGXGAGPXXRXCFFXGXGXGRGGXGAG 873
GGG G G C G G G GG G G
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCG 132
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = -2
Query: 995 PPPXPGKXXMVXXGGGXGAG----PXXRXCFFXGXGXGRGGXGAG 873
PPP P GGG G G P C G G G GG G G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPC---GGGCGGGGGGCG 91
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 956 GGGXGAGPXXRXCFFXGXGXGRGGXGAG 873
GGG G G C G G G GG G G
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCG 125
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 956 GGGXGAGPXXRXCFFXGXGXGRGGXGAG 873
GGG G G C G G G GG G G
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCG 132
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = -2
Query: 995 PPPXPGKXXMVXXGGGXGAG----PXXRXCFFXGXGXGRGGXGAG 873
PPP P GGG G G P C G G G GG G G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPC---GGGCGGGGGGCG 91
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Frame = +3
Query: 879 PPPPPSXPXPXKKTXXXGGXR-----XXPPPP 959
PPPPP P P +T G R PPPP
Sbjct: 203 PPPPPKPPMPDLRTKEPIGIRSWNGSGIPPPP 234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,842,241
Number of Sequences: 27780
Number of extensions: 263952
Number of successful extensions: 2000
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2615559500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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